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Mapping Data
Experiment
  • Experiment
    TEXT-QTL
  • Chromosome
    4
  • Reference
    J:150240 Norgard EA, et al., Identification of quantitative trait loci affecting murine long bone length in a two-generation intercross of LG/J and SM/J Mice. J Bone Miner Res. 2008 Jun;23(6):887-95
  • ID
    MGI:4352916
Genes
GeneAlleleAssay TypeDescription
Lbn11
Lbn21
Notes
  • Experiment
    QTLs for long bone length were mapped in F2 and F3 generations of an intercross of
    LG/J and SM/J mice. LG/J mice were selected for large body size (~40 g) at 60 days and SM/J mice were selected for small body size (~20 g) at 60 days. There were 506 F2 Mice and 1605 F3 mice.
    . The following results were obtained :next to the Marker and Chr in parenthesis are recorded the, cM location, Mbp location ,and nearest SNP

    Chr1
    Lbn1c (Chr 1,19 cM,41.03 Mbp ,rs13475,837)
    Lbn1(Chr 1, 19 cM, 89.08 Mbp, petM22381-169-2)
    Lbn18 (Chr1, 56 cM, 152.21 Mbp, rs3688042).

    Chr 2
    Lbn2a (45 cM, 77.35 Mbp, rs3713848)
    Lbn2 (76cM, 156.29 Mbp, gnf02.161.674)

    Chr3
    Lbn3a (29cM, 60.39 Mbp, rs13477154)
    Lbn19 (60cM, 115.92 Mbp,rs13477364)
    Lbn20 (81cM, 145.80 Mbp,rs3722447)

    Chr4
    Lbn11 (29cM, 63.67 Mbp, gnf04.062.327)
    Lbn21 (64cM, 133.39 Mbp, rs13477996)

    Chr5
    Lbn22 (64cM, 128.12 Mbp, rs6377710)

    Chr 6:
    Lbn23(37 cM 85.33 Mbp, rs13478882)
    Lbn5c (72 cM, 144.01 Mbp rs6199136)

    Cht7:
    Lbn6a (25 cM 50.Mbp, gnf07.056.997)

    Chr8:
    Lbn7b (2 cM, 9..80, Mbp, rs6273176)
    Lbn7a (39 cM 71.85, Mbp, rs13479811)

    Chr9:
    Lbn24(13.5 cM , 29.85 Mbp, CEL-9_29909656)
    Lbn25(42.4 cM 73.42 Mbp rs13480273)
    Lbn8c(74 cM 119.74 Mbp, rs8254378)

    Chr 10
    Lbn9a(33 cM 82.11 Mbp , rs13480678)
    Lbn9b(66 cM127.64 Mbp, rs6290842)

    Chr 11:
    Lbn26 (7 cM16.57 Mbp, rs3724116)

    Chr 13:
    Lbn14 (48 cM 98.97 Mbp, rs13481990)

    Chr14

    Lbn27 (43cM 93.07 Mbp, rs3718262)

    Chr15:
    Lbn28 (25 cM 60.88 Mbp, rs4139476)
    Lbn29( 43cM, 87.73 Mbp, rs3720931)

    Chr 17:
    Lbn10a(17 cM, 41.06 Mbp, CEL-17_40073719)

    Chr 19
    Lbn17 (4 cM 10.79 Mbp, rs6307076)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
11/12/2024
MGI 6.24
The Jackson Laboratory