Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  1
• Reference
  J:12786 Malo D, et al., High-resolution linkage map in the vicinity of the host resistance locus Bcg. Genomics. 1993 Jun;16(3):655-63
• ID
  MGI:43538

Genes

Gene	Assay Type
D1Mcg163	reported elsewhere
Fn1	reported elsewhere
Tnp1	reported elsewhere
D1Mcg2	PCR amplified length variant
D1Mcg105	Southern analysis
D1Mcg165	reported elsewhere
Vil1	reported elsewhere
D1Mcg6	PCR amplified length variant
D1Mcg136	Southern analysis
D1Mit7	PCR amplified length variant
Des	reported elsewhere
Inha	reported elsewhere

Notes

• Reference
  Authors use Lsh for Nramp1, Lsh is an allele of Nramp1.
• Experiment
  Offspring types indicate alleles inherited from F1 parent.
  

CROSS

• Type
  Backcross, female
• Female Parent
  <b> <b> <b> <b> <b> <b> <b> <b>/<s> <s> <s> <s> <s> <s> <s> <s>
• Strain
  (M. spretus x C57BL/6)F1
• Male Parent
  <b> <b> <b> <b> <b> <b> <b> <b>/<b> <b> <b> <b> <b> <b> <b> <b>
• Strain
  C57BL/6J
• Allele 1
  b from C57BL/6J
• Allele 2
  s from M. spretus

CROSS Data

MC #mice	Tnp1	D1Mcg2	D1Mcg165	Vil1	D1Mcg6	D1Mit7	Des	Inha
117	s	s	s	s	s	s	s	s
133	b	b	b	b	b	b	b	b
1	b	s	s	s	s	s	s	s
1	s	b	b	b	b	b	b	b
1	b	b	b	b	b	b	b	s
0	s	s	s	s	s	s	s	b

Additional Mice Typed Only for Specific Pairs of Loci

Marker 1	Marker 2	# Recombinants	# Parentals
D1Mcg163	Fn1	3	186
Fn1	Tnp1	4	249
Tnp1	D1Mcg105	2	251
D1Mcg105	D1Mcg165	0	253
Vil1	D1Mcg136	0	253
D1Mcg136	D1Mit7	0	253
D1Mcg136	Des	0	253

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Tnp1	D1Mcg2	2	253	0.791	0.557
D1Mcg2	D1Mcg165	0	253	0.000	0.000
D1Mcg165	Vil1	0	253	0.000	0.000
Vil1	D1Mcg6	0	253	0.000	0.000
D1Mcg6	D1Mit7	0	253	0.000	0.000
D1Mit7	Des	0	253	0.000	0.000
Des	Inha	1	253	0.395	0.394