Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  9
• Reference
  J:16935 Danielson PE, et al., Chromosomal mapping of mouse genes expressed selectively within the central nervous system. Genomics. 1994 Feb;19(3):454-61
• ID
  MGI:43969

Genes

Gene	Assay Type	Description
Ppib-rs1	Southern analysis	CPH2
D9Mit2	reported elsewhere
Nrgn	Southern analysis	RC3
Xmv16	Southern analysis
D9Mit21	reported elsewhere
Xmv15	Southern analysis
Ppib-rs2	Southern analysis	CPH2
D9Mit8	PCR amplified length variant
D9Mit24	PCR amplified length variant
Camkl	Southern analysis	1G5
Pltr6	Southern analysis
D9Mit17	PCR amplified length variant
Cpu3	Southern analysis	CPU3

Notes

• Experiment
  Detailed mapping of these markers can be found by selecting the JAX link highlighted below.Offspring types indicate alleles inherited from F1 parent.
  F1 direction known.
  

CROSS

• Type
  Backcross, female
• Female Parent
  <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>/<s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s>
• Strain
  (C57BL/6JEi x SPRET/Ei)F1
• Male Parent
  <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s>/<s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s>
• Strain
  SPRET/EiJ
• Mapping Panel
  JAX (BSS)
• Allele 1
  b from C57BL/6JEiJ
• Allele 2
  s from SPRET/EiJ

CROSS Data

MC #mice	Ppib-rs1	D9Mit2	Nrgn	Xmv16	D9Mit21	Ppib-rs2	D9Mit8	D9Mit24	Camkl	Pltr6	D9Mit17	Cpu3
17	b	b	b	b	b	b	b	b	b	b	b	b
19	s	s	s	s	s	s	s	s	s	s	s	s
3	b	s	s	s	s	s	s	s	s	s	s	s
6	s	b	b	b	b	b	b	b	b	b	b	b
1	b	b	b	s	s	s	s	s	s	s	s	s
1	s	s	s	b	b	b	b	b	b	b	b	b
2	b	b	b	b	s	s	s	s	s	s	s	s
1	s	s	s	s	b	b	b	b	b	b	b	b
1	b	b	b	b	b	s	s	s	s	s	s	s
2	s	s	s	s	s	b	b	b	b	b	b	b
1	b	b	b	b	b	b	s	s	s	s	s	s
2	s	s	s	s	s	s	b	b	b	b	b	b
6	b	b	b	b	b	b	b	s	s	s	s	s
7	s	s	s	s	s	s	s	b	b	b	b	b
1	b	b	b	b	b	b	b	b	b	s	s	s
4	b	b	b	b	b	b	b	b	b	b	s	s
1	s	s	s	s	s	s	s	s	s	s	b	b
1	b	b	b	b	b	b	b	b	b	b	b	s
2	s	s	s	s	s	s	s	s	s	s	s	b
2	b	s	s	s	s	s	s	b	b	b	b	b
2	s	b	b	b	b	b	b	s	s	s	s	s
1	b	s	s	s	s	s	s	s	s	s	b	b
2	b	s	s	s	s	s	s	s	s	s	s	b

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Ppib-rs1	D9Mit2	16	85	18.824	4.240
D9Mit2	Nrgn	0	85	0.000	0.000
Nrgn	Xmv16	2	85	2.353	1.644
Xmv16	D9Mit21	3	85	3.529	2.001
D9Mit21	Ppib-rs2	3	85	3.529	2.001
Ppib-rs2	D9Mit8	3	85	3.529	2.001
D9Mit8	D9Mit24	17	85	20.000	4.339
D9Mit24	Camkl	0	85	0.000	0.000
Camkl	Pltr6	1	85	1.176	1.170
Pltr6	D9Mit17	6	85	7.059	2.778
D9Mit17	Cpu3	5	85	5.882	2.552