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Mapping Data
Experiment
  • Experiment
    CROSS
  • Chromosome
    4
  • Reference
    J:20039 Fiedorek FT Jr, et al., Mapping of PCR-based markers for mouse chromosome 4 on a backcross penetrant for the misty (m) mutation. Mamm Genome. 1994 Aug;5(8):479-85
  • ID
    MGI:44250
Genes
GeneAlleleAssay TypeDescription
Mos PCR amplified length variant Mos-pA, Mos-pB
D4Rck2 PCR amplified length variant D4Rck2
D4Mit191 PCR amplified length variant MT2086
D4Mit18 PCR amplified length variant A749
D4Mit1 PCR amplified length variant A73
D4Mit2 PCR amplified length variant L67
D4Nds4 PCR amplified length variant D4Nds4-pA, D4Nds4-pB
D4Nds3 PCR amplified length variant D4Nds3-pA, D4Nds3B
D4Mit41 PCR amplified length variant D505
D4Mit39 PCR amplified length variant B198
D4Mit4 PCR amplified length variant M31
D4Mit23 PCR amplified length variant B119
D4Mit24 PCR amplified length variant A643
D4Mit5 PCR amplified length variant A1
D4Mit38 PCR amplified length variant A881
Mup1 Southern analysis p499
Orm1 PCR amplified length variant D1
Tyrp1 Tyrp1b PCR amplified length variant b-pA, b-pB
D4Wsm1 PCR amplified length variant F1
D4Mit15 PCR amplified length variant A122
D4Mit9 PCR amplified length variant M241
D4Mit205 PCR amplified length variant M205
Jun PCR amplified length variant Jun-pA, Jun-pB
D4Mit28 PCR amplified length variant A799
Dock7 visible phenotype
D4Mit29 PCR amplified length variant P90
D4Mit31 PCR amplified length variant B133
D4Mit43 PCR amplified length variant J14
Slc2a1 Southern analysis Glut1 cDNA1
D4Mit37 PCR amplified length variant A709
Mycl PCR amplified length variant DB50, DB49
D4Nds2 PCR amplified length variant T24
D4Mit11 PCR amplified length variant M8
D4Mit12 PCR amplified length variant M15
Lck PCR amplified length variant Lck-pA, Lck-pB
D4Mit16 PCR amplified length variant A65
D4Mit54 PCR amplified length variant B463
D4Mit32 PCR amplified length variant B329
Nppa PCR amplified length variant Nppa-pA, Nppa-pB
D4Mit42 PCR amplified length variant J5
D4Mit33 PCR amplified length variant B333
D4Smh6b PCR amplified length variant D4Smh6b4-pA, D4Smh6b-pB
Notes
  • Experiment
    F1 direction known.
CROSS
  • Type
    Backcross, female
  • Female Parent
    <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c>/<b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>
  • Strain
    (CZECHII x C57BLKS/J-Dock7)F1
  • Male Parent
    <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>/<b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>
  • Strain
    BKS.D-Dock7
  • Allele 1
    c from CZECHII
  • Allele 2
    b from BKS.D-Dock7
CROSS Data
MC #mice Mos D4Rck2 D4Mit191 D4Mit18 D4Mit1 D4Mit2 D4Nds4 D4Nds3 D4Mit41 D4Mit39 D4Mit4 D4Mit23 D4Mit24 D4Mit5 D4Mit38 Mup1 Orm1 Tyrp1 D4Wsm1 D4Mit15 D4Mit9 D4Mit205 Jun D4Mit28 Dock7 D4Mit29 D4Mit31 D4Mit43 Slc2a1 D4Mit37 Mycl D4Nds2 D4Mit11 D4Mit12 Lck D4Mit16 D4Mit54 D4Mit32 Nppa D4Mit42 D4Mit33 D4Smh6b
31 c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c
26 b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b
3 b c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c
1 b b b c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c
3 b b b b b c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c
1 b b b b b b c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c
1 b b b b b b b c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c
2 c c c c c c c c c c b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b
1 b b b b b b b b b b c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c
1 c c c c c c c c c c c b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b
3 b b b b b b b b b b b c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c
1 b b b b b b b b b b b b b c c c c c c c c c c c c c c c c c c c c c c c c c c c c c
1 c c c c c c c c c c c c c c b b b b b b b b b b b b b b b b b b b b b b b b b b b b
2 c c c c c c c c c c c c c c c b b b b b b b b b b b b b b b b b b b b b b b b b b b
1 b b b b b b b b b b b b b b b c c c c c c c c c c c c c c c c c c c c c c c c c c c
1 b b b b b b b b b b b b b b b b c c c c c c c c c c c c c c c c c c c c c c c c c c
6 c c c c c c c c c c c c c c c c c b b b b b b b b b b b b b b b b b b b b b b b b b
2 b b b b b b b b b b b b b b b b b c c c c c c c c c c c c c c c c c c c c c c c c c
1 b b b b b b b b b b b b b b b b b b c c c c c c c c c c c c c c c c c c c c c c c c
4 c c c c c c c c c c c c c c c c c c b b b b b b b b b b b b b b b b b b b b b b b b
1 c c c c c c c c c c c c c c c c c c c c b b b b b b b b b b b b b b b b b b b b b b
2 b b b b b b b b b b b b b b b b b b b b c c c c c c c c c c c c c c c c c c c c c c
1 b b b b b b b b b b b b b b b b b b b b b c c c c c c c c c c c c c c c c c c c c c
1 c c c c c c c c c c c c c c c c c c c c c c b b b b b b b b b b b b b b b b b b b b
1 b b b b b b b b b b b b b b b b b b b b b b b c c c c c c c c c c c c c c c c c c c
1 b b b b b b b b b b b b b b b b b b b b b b b b c c c c c c c c c c c c c c c c c c
1 c c c c c c c c c c c c c c c c c c c c c c c c c b b b b b b b b b b b b b b b b b
2 b b b b b b b b b b b b b b b b b b b b b b b b b c c c c c c c c c c c c c c c c c
2 b b b b b b b b b b b b b b b b b b b b b b b b b b c c c c c c c c c c c c c c c c
1 b b b b b b b b b b b b b b b b b b b b b b b b b b b c c c c c c c c c c c c c c c
2 c c c c c c c c c c c c c c c c c c c c c c c c c c c c b b b b b b b b b b b b b b
1 b b b b b b b b b b b b b b b b b b b b b b b b b b b b b c c c c c c c c c c c c c
1 c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c b b b b b b b b b b b b
2 b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b c c c c c c c c c c c c
1 c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c b b b b b b b b b b b
2 c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c b b b b b b b b
1 b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b c c c c c c c c
1 b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b c c c c c c c
7 c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c b b b b b b
6 b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b c c c c c c
2 c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c b b b b b
1 b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b c c c c c
3 c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c b b b b
2 b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b c c c c
1 b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b c c
1 c b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b c c c c c c
2 b c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c b b b b b b
1 b b b b c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c b b b b b b b
2 c c c c b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b b c c c c c c
1 c c c c c b b b b b b b b b b b b b b b b b b b b c c c c c c c c c c c c c c c c c
2 b b b b b c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c b b b b b b
1 b b b b b c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c b b b b
1 c c c c c c b b b b b b b b b b b b b b b b b b b c c c c c c c c c c c c c c c c c
1 b b b b b b c c c c c c c c c c c c c c c c c c c c c c c c c c c c c c b b b b b b
1 b b b b b b b b b c c c c c c c c c c c c c c c c c c c c c c c c c c c b b b b b b
1 b b b b b b b b b b c c c c c c c c b b b b b b b b b b b b b b b b b b b b b b b b
1 b b b b b b b b b b c c c c c c c c c c c c c c c c c c c c c c c c c c b b b b b b
1 c c c c c c c c c c b b b b b b b b b b b b b b b b b b b b b b b b b b b b c c c c
1 c c c c c c c c c c c c c c c b b b b b b b b b b b b b b b b b b b b b c c c c c c
1 b b b b b b b b b b b b b b b c c c c c c c c c c c c c c c c c c c c c b b b b b b
1 b b b b b b b b b b b b b b b c c c c c c c c c c c c c c c c c c c c c c c c c c b
1 b b b b b b b b b b b b b b b b b c c c c c c c c c c c c c c c c c c c b b b b b b
Statistics
Marker 1 Marker 2 # Recombinants Total % Recombinants Std Error
Mos D4Rck2 6 158 3.797 1.521
D4Rck2 D4Mit191 0 158 0.000 0.000
D4Mit191 D4Mit18 1 158 0.633 0.631
D4Mit18 D4Mit1 3 158 1.899 1.086
D4Mit1 D4Mit2 7 158 4.430 1.637
D4Mit2 D4Nds4 3 158 1.899 1.086
D4Nds4 D4Nds3 1 158 0.633 0.631
D4Nds3 D4Mit41 0 158 0.000 0.000
D4Mit41 D4Mit39 1 158 0.633 0.631
D4Mit39 D4Mit4 6 158 3.797 1.521
D4Mit4 D4Mit23 4 158 2.532 1.250
D4Mit23 D4Mit24 0 158 0.000 0.000
D4Mit24 D4Mit5 1 158 0.633 0.631
D4Mit5 D4Mit38 1 158 0.633 0.631
D4Mit38 Mup1 6 158 3.797 1.521
Mup1 Orm1 1 158 0.633 0.631
Orm1 Tyrp1 9 158 5.696 1.844
Tyrp1 D4Wsm1 6 158 3.797 1.521
D4Wsm1 D4Mit15 0 158 0.000 0.000
D4Mit15 D4Mit9 3 158 1.899 1.086
D4Mit9 D4Mit205 1 158 0.633 0.631
D4Mit205 Jun 1 158 0.633 0.631
Jun D4Mit28 1 158 0.633 0.631
D4Mit28 Dock7 1 158 0.633 0.631
Dock7 D4Mit29 5 158 3.165 1.393
D4Mit29 D4Mit31 2 158 1.266 0.889
D4Mit31 D4Mit43 1 158 0.633 0.631
D4Mit43 Slc2a1 2 158 1.266 0.889
Slc2a1 D4Mit37 1 158 0.633 0.631
D4Mit37 Mycl 3 158 1.899 1.086
Mycl D4Nds2 1 158 0.633 0.631
D4Nds2 D4Mit11 0 158 0.000 0.000
D4Mit11 D4Mit12 0 158 0.000 0.000
D4Mit12 Lck 3 158 1.899 1.086
Lck D4Mit16 2 158 1.266 0.889
D4Mit16 D4Mit54 26 158 16.456 2.950
D4Mit54 D4Mit32 3 158 1.899 1.086
D4Mit32 Nppa 7 158 4.430 1.637
Nppa D4Mit42 0 158 0.000 0.000
D4Mit42 D4Mit33 1 158 0.633 0.631
D4Mit33 D4Smh6b 1 158 0.633 0.631

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
10/29/2024
MGI 6.24
The Jackson Laboratory