Mapping Data

Experiment

• Experiment
  RI
• Chromosome
  4
• Reference
  J:21511 Kaushik N, et al., Intracisternal A-type particle elements as genetic markers: detection by repeat element viral element amplified locus-PCR. Mamm Genome. 1994 Nov;5(11):688-95
• ID
  MGI:44347

Genes

Gene	Assay Type	Description
Mtv17	reported elsewhere
Ifna	reported elsewhere
Cyp4a10	reported elsewhere
Xmv9	reported elsewhere
Iap3ra18	PCR amplified length variant	JS139, JS134
Iap3rb12	PCR amplified length variant	JS139, JS135
Iap3rb13	PCR amplified length variant	JS139, JS135
Iap3rc15	PCR amplified length variant	JS139, JS136
Iap3rc20	PCR amplified length variant	JS139, JS136
Iap5ra10	PCR amplified length variant	JS140, JS134
Iap3rb18	PCR amplified length variant	JS139, JS135
Iap5rb24	PCR amplified length variant	JS140, JS135
Iap5rc20	PCR amplified length variant

RI

• Origin
  BALB/cHeA x STS/A
• Designation
  CXS
• Abbreviation 1
  C
• Abbreviation 2
  S

RI Data (columns show RI Lines sampled)

Marker	1	2	3	4	5	6	7	8	9	10	11	12	13	14
Iap3ra18	S	S	S	S	S	C	C	S	S	S	S	S	S	C
Iap3rb12	C	S	C	C	S	C	C	S	C	S	S	C	C	S
Iap3rb13	C	S	C	C	S	C	C	S	C	S	S	C	C	S
Iap3rc15	C	S	C	C	S	C	C	C	C	S	S	S	C	S
Iap3rc20	S	S	S	S	S	C	C	S	S	S	S	S	S	C
Iap5ra10	C	S	C	C	C	C	C	S	C	S	S	S	C	S
Iap3rb18	C	S	C	C	C	C	C	S	C	C	S	S	C	S
Iap5rb24	C	S	C	C	S	C	C	C	C	S	S	S	C	S
Iap5rc20	S	S	S	S	S	C	C	S	S	S	S	S	S	C

2x2 Data

Marker 1	Marker 2	Discordant	Strains	RI Sets
Iap3ra18	Xmv9	0	14	CXS
Iap3rb12	Ifna	0	13	CXS
Iap3rb13	Ifna	0	13	CXS
Iap3rc15	Mtv17	0	14	CXS
Iap3rc20	Xmv9	0	14	CXS
Iap5ra10	Cyp4a10	0	14	CXS
Iap3rb18	Mtv17	0	14	CXS
Iap5rb24	Xmv9	0	14	CXS

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Iap3ra18	Iap3rb12	7	14	50.000	53.452
Iap3rb12	Iap3rb13	0	14	0.000	0.000
Iap3rb13	Iap3rc15	2	14	4.545	3.787
Iap3rc15	Iap3rc20	7	14	50.000	53.452
Iap3rc20	Iap5ra10	7	14	50.000	53.452
Iap5ra10	Iap3rb18	1	14	2.000	2.159
Iap3rb18	Iap5rb24	3	14	7.895	5.954
Iap5rb24	Iap5rc20	7	14	50.000	53.452