Mapping Data

Experiment

• Experiment
  RI
• Chromosome
  5
• Reference
  J:21511 Kaushik N, et al., Intracisternal A-type particle elements as genetic markers: detection by repeat element viral element amplified locus-PCR. Mamm Genome. 1994 Nov;5(11):688-95
• ID
  MGI:44348

Genes

Gene	Allele	Assay Type	Description
Pgm2		reported elsewhere
Pde6b	Pde6b^rd1	reported elsewhere
Pmv12		reported elsewhere
Mr66-1		reported elsewhere
Iap3ra8		PCR amplified length variant	JS139, JS134
Iap3rb1		PCR amplified length variant	JS139, JS135
Iap3rb3		PCR amplified length variant	JS139, JS135
Iap3rc9		PCR amplified length variant	JS139, JS136
Iap5ra2		PCR amplified length variant	JS139, JS134
Iap5rb7		PCR amplified length variant

RI

• Origin
  C57BL/6J x C3H/HeJ
• Designation
  BXH
• Abbreviation 1
  B
• Abbreviation 2
  H

RI Data (columns show RI Lines sampled)

Marker	2	3	4	6	7	8	9	10	11	12	14	19
Iap3ra8	H	H	H	B	B	B	H	H	B	B	H	H
Iap3rb1	H	H	H	B	B	H	H	B	B	B	H	H
Iap3rb3	H	H	H	B	B	H	H	B	B	B	H	H
Iap3rc9	H	H	H	B	H	H	H	B	B	B	H	H
Iap5ra2	B	H	H	H	B	B	H	H	B	B	H	H
Iap5rb7	B	H	H	H	B	B	H	H	B	B	H	H

2x2 Data

Marker 1	Marker 2	Discordant	Strains	RI Sets
Iap3ra8	Mr66-1	0	12	BXH
Iap3rb1	Pgm2	0	12	BXH
Iap3rb3	Pgm2	0	12	BXH
Iap3rc9	Pde6b	0	12	BXH
Iap5ra2	Pmv12	0	12	BXH
Iap5rb7	Pmv12	0	12	BXH

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Iap3ra8	Iap3rb1	2	12	5.556	4.781
Iap3rb1	Iap3rb3	0	12	0.000	0.000
Iap3rb3	Iap3rc9	1	12	2.381	2.605
Iap3rc9	Iap5ra2	5	12	27.778	25.301
Iap5ra2	Iap5rb7	0	12	0.000	0.000