Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  15
• Reference
  J:22801 Fiedorek FT Jr, et al., Mapping of the focal adhesion kinase (Fadk) gene to mouse chromosome 15 and human chromosome 8. Mamm Genome. 1995 Feb;6(2):123-6
• ID
  MGI:44645

Genes

Gene	Assay Type	Description
D15Mit13	PCR amplified length variant	A36
D15Mit17	PCR amplified length variant	D22
D15Mit3	PCR amplified length variant	L78
D15Nds1	PCR amplified length variant	TJ-2.17
Ptk2	allele specific oligonucleotide hybridization	MUSFAKZ, MUSFAK1 and MUSFAK2
D15Mit29	PCR amplified length variant	B381
D15Mit31	PCR amplified length variant	P85
D15Mit14	PCR amplified length variant	D17
D15Mit35	PCR amplified length variant	A1092

Notes

• Experiment
  Fadk was typed using allele specific oligonucleotide hybridization (ASO) where MUSFAK1 and MUSFAK2 were used as PCR primers and MUSFAKZ was used as the hybridization probe.Offspring types indicate alleles inherited from F1 parent.
  

CROSS

• Type
  Backcross, sexes unspecified or combined
• Female Parent
  <b> <b> <b> <b> <b> <b> <b> <b> <b>/<c> <c> <c> <c> <c> <c> <c> <c> <c>
• Strain
  (C57BLKS/J x CZECHII)F1
• Male Parent
  <b> <b> <b> <b> <b> <b> <b> <b> <b>/<b> <b> <b> <b> <b> <b> <b> <b> <b>
• Strain
  C57BLKS/J
• Allele 1
  b from C57BLKS/J
• Allele 2
  c from CZECHII

CROSS Data

MC #mice	D15Mit13	D15Mit17	D15Mit3	D15Nds1	Ptk2	D15Mit29	D15Mit31	D15Mit14	D15Mit35
43	c	c	c	c	c	c	c	c	c
37	b	b	b	b	b	b	b	b	b
19	c	b	b	b	b	b	b	b	b
19	b	c	c	c	c	c	c	c	c
4	c	c	b	b	b	b	b	b	b
7	b	b	c	c	c	c	c	c	c
1	b	b	b	c	c	c	c	c	c
1	c	c	c	c	b	b	b	b	b
2	b	b	b	b	b	c	c	c	c
1	c	c	c	c	c	c	b	b	b
4	b	b	b	b	b	b	c	c	c
9	c	c	c	c	c	c	c	b	b
8	b	b	b	b	b	b	b	c	c
1	c	c	c	c	c	c	c	c	b
1	c	b	b	b	b	b	b	c	c
1	b	c	c	c	c	c	c	b	b

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
D15Mit13	D15Mit17	40	158	25.316	3.459
D15Mit17	D15Mit3	11	158	6.962	2.025
D15Mit3	D15Nds1	1	158	0.633	0.631
D15Nds1	Ptk2	1	158	0.633	0.631
Ptk2	D15Mit29	2	158	1.266	0.889
D15Mit29	D15Mit31	5	158	3.165	1.393
D15Mit31	D15Mit14	19	158	12.025	2.588
D15Mit14	D15Mit35	1	158	0.633	0.631