Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  1
• Reference
  J:25244 Stanier P, et al., Genetic basis of neural tube defects: the mouse gene loop-tail maps to a region of chromosome 1 syntenic with human 1q21-q23. Genomics. 1995 Apr 10;26(3):473-8
• ID
  MGI:44990

Genes

Gene	Assay Type	Description
D1Mit14	PCR amplified length variant
D1Mit15	PCR amplified length variant
D1Mit36	PCR amplified length variant
D1Mit111	PCR amplified length variant
D1Mit205	PCR amplified length variant
D1Mit270	PCR amplified length variant
Fcgr2b	PCR amplified length variant
Mpz	Southern analysis	Mpp cDNA
D1Mit113	PCR amplified length variant
D1Mit146	PCR amplified length variant
Vangl2	visible phenotype
Crp	PCR amplified length variant
Fcer1a	Southern analysis	Fcer1a cDNA1
Ifi204	Southern analysis	Ifi204 cDNA
D1Mit151	reported elsewhere
D1Mit17	reported elsewhere

Notes

• Experiment
  Only Lp/+ mice were analyzed.Offspring types indicate alleles inherited from F1 parent.
  

CROSS

• Type
  Backcross, male
• Female Parent
  <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c>/<c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c>
• Strain
  CBA/Ca
• Male Parent
  <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c>/<l> <l> <l> <l> <l> <l> <l> <l> <l> <l> <l> <l> <l> <l> <l> <l>
• Strain
  (CBA/Ca x LPT/Le)F1-Vangl2
• Allele 1
  c from CBA/Ca
• Allele 2
  l from LPT/LeJ

CROSS Data

MC #mice	D1Mit14	D1Mit15	D1Mit36	D1Mit111	D1Mit205	D1Mit270	Fcgr2b	Mpz	D1Mit113	D1Mit146	Vangl2	Crp	Fcer1a	Ifi204	D1Mit151	D1Mit17
130	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l
15	.	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l
9	c	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l
1	c	c	c	c	c	c	l	l	l	l	l	l	l	l	l	l
5	c	c	c	c	c	c	c	c	c	c	l	l	l	l	l	l
12	l	l	l	l	l	l	l	l	l	l	l	l	l	l	c	c
20	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	c

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
D1Mit14	D1Mit15	9	177	5.085	1.651
D1Mit15	D1Mit36	0	192	0.000	0.000
D1Mit36	D1Mit111	0	192	0.000	0.000
D1Mit111	D1Mit205	0	192	0.000	0.000
D1Mit205	D1Mit270	0	192	0.000	0.000
D1Mit270	Fcgr2b	1	192	0.521	0.519
Fcgr2b	Mpz	0	192	0.000	0.000
Mpz	D1Mit113	0	192	0.000	0.000
D1Mit113	D1Mit146	0	192	0.000	0.000
D1Mit146	Vangl2	5	192	2.604	1.149
Vangl2	Crp	0	192	0.000	0.000
Crp	Fcer1a	0	192	0.000	0.000
Fcer1a	Ifi204	0	192	0.000	0.000
Ifi204	D1Mit151	12	192	6.250	1.747
D1Mit151	D1Mit17	20	192	10.417	2.205