Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  1
• Reference
  J:25243 Mullick A, et al., High-resolution linkage map in the vicinity of the Lp locus. Genomics. 1995 Apr 10;26(3):479-88
• ID
  MGI:45116

Genes

Gene	Assay Type	Description
D1Mit42	PCR amplified length variant	A664
D1Mit63	PCR amplified length variant	B742
D1Mit110	PCR amplified length variant	MPC179
Cd247	Southern analysis	Cd3z cDNA1 and pBS17
Atp1b1	Southern analysis	19G
D1Mit145	PCR amplified length variant	MPC13
D1Hun14	SSCP
D1Mit112	PCR amplified length variant	MPC194
D1Mit111	PCR amplified length variant	MPC1603
D1Mit114	PCR amplified length variant	MPC1507
D1Mit36	PCR amplified length variant	B327
D1Mit148	PCR amplified length variant	D921
D1Mit205	PCR amplified length variant	MMH289
D1Mit146	PCR amplified length variant	MPC2238
D1Mit270	PCR amplified length variant	MT2563
Fcgr2b	Southern analysis	Fcgr2 cDNA1
Mpz	Southern analysis	Mpp cDNA1
Apoa2	Southern analysis	Apoa2 cDNA1
Fcer1g	Southern analysis	Fcer1g probe1
Vangl2	visible phenotype
D1Mit149	PCR amplified length variant	MPC1817
Spta1	Southern analysis	pMaSp
Fcer1a	Southern analysis	Fcer1a probe1
D1Mit115	PCR amplified length variant	MPC514
D1Mit62	PCR amplified length variant	B737
D1Mit17	PCR amplified length variant	M41

Notes

• Reference
  Authors use Cd3h which been withdrawn to equal Cd3z.
• Experiment
  Only Lp mice were analyzed.Offspring types indicate alleles inherited from F1 parent.
  

CROSS

• Type
  Backcross, sexes unspecified or combined
• Female Parent
  <l> <l> <l> <l> <l> <l> <l> <l> <l> <l> <l> <l> <l> <l> <l> <l> <l> <l> <l> <l> <l> <l> <l> <l> <l> <l>/<s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s>
• Strain
  (LPT/Le Vangl2/+ x SWR/J)F1
• Male Parent
  <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s>/<s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s>
• Strain
  SWR/J
• Allele 1
  l from LPT/LeJ
• Allele 2
  s from SWR/J

CROSS Data

MC #mice	D1Mit42	D1Mit63	D1Mit110	Cd247	Atp1b1	D1Mit145	D1Hun14	D1Mit112	D1Mit111	D1Mit114	D1Mit36	D1Mit148	D1Mit205	D1Mit146	D1Mit270	Fcgr2b	Mpz	Apoa2	Fcer1g	Vangl2	D1Mit149	Spta1	Fcer1a	D1Mit115	D1Mit62	D1Mit17
240	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l
6	s	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l
3	s	s	s	s	s	s	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l
1	s	s	s	s	s	s	s	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l
1	s	s	s	s	s	s	s	s	s	s	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l
2	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	l	l	l	l	l	l	l	l	l
1	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	s	l	l	l	l	l	l	l
1	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	s	s	s	s	s	s
4	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	.	.	s	s	s
2	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	s	s	s	.
2	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	l	.	s

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
D1Mit42	D1Mit63	6	263	2.281	0.921
D1Mit63	D1Mit110	0	263	0.000	0.000
D1Mit110	Cd247	0	263	0.000	0.000
Cd247	Atp1b1	0	263	0.000	0.000
Atp1b1	D1Mit145	0	263	0.000	0.000
D1Mit145	D1Hun14	3	263	1.141	0.655
D1Hun14	D1Mit112	1	263	0.380	0.380
D1Mit112	D1Mit111	0	263	0.000	0.000
D1Mit111	D1Mit114	0	263	0.000	0.000
D1Mit114	D1Mit36	1	263	0.380	0.380
D1Mit36	D1Mit148	0	263	0.000	0.000
D1Mit148	D1Mit205	0	263	0.000	0.000
D1Mit205	D1Mit146	0	263	0.000	0.000
D1Mit146	D1Mit270	0	263	0.000	0.000
D1Mit270	Fcgr2b	0	263	0.000	0.000
Fcgr2b	Mpz	0	263	0.000	0.000
Mpz	Apoa2	2	263	0.760	0.536
Apoa2	Fcer1g	0	263	0.000	0.000
Fcer1g	Vangl2	1	263	0.380	0.380
Vangl2	D1Mit149	1	263	0.380	0.380
D1Mit149	Spta1	0	259	0.000	0.000
Spta1	Fcer1a	2	259	0.772	0.544
Fcer1a	D1Mit115	0	259	0.000	0.000
D1Mit115	D1Mit62	0	261	0.000	0.000
D1Mit62	D1Mit17	0	259	0.000	0.000