Mapping Data

Experiment

• Experiment
  RI
• Chromosome
  9
• Reference
  J:25506 Sudo T, et al., Identification and minisatellite linkage analysis of SMXA recombinant inbred strains of mice by DNA fingerprinting. Jikken Dobutsu. 1995 Apr;44(2):87-93
• ID
  MGI:45231

Genes

Gene	Assay Type	Description
Ms13-12	Southern analysis	M13 phage probe
Ms13-24	Southern analysis	M13 phage probe
Ms13-34	Southern analysis	M13 phage probe
Ms13-5	Southern analysis	M13 phage probe
D9Mit10	reported elsewhere
D9Mit14	reported elsewhere
D9Mit8	reported elsewhere

Notes

• Reference
  Authors indicate linkage of Ms13-34 with Chromosome 9 locus M10 (0/27 recombinants) and Ms13-4 with GT-53 on Chromosome 16 with 5/27 recombinants. M10 and GT-53 are not identified.

RI

• Origin
  SM/J x A/J
• Designation
  SMXA
• Abbreviation 1
  A
• Abbreviation 2
  S

RI Data (columns show RI Lines sampled)

Marker	1	3	4	5	6	7	8	9	10	11	12	14	15	6	17	18	19	20	21	21d	22	23	24	25	26	27	29	30
Ms13-12	A	A	A	S	A	A	A	A	A	S	A	S	S	A	A	A	S	S	S	S	S	S	S	A	S	S	S	S
Ms13-24	S	A	A	S	S	S	A	S	A	S	A	S	S	A	A	A	S	S	S	S	S	S	S	A	S	S	S	A
Ms13-34	A	A	S	S	S	A	A	A	A	S	S	A	S	A	A	A	S	A	A	A	S	A	A	A	A	S	A	A
Ms13-5	A	A	A	S	A	A	S	A	S	S	A	S	A	A	A	A	S	A	S	S	A	A	S	S	S	S	A	S

2x2 Data

Marker 1	Marker 2	Discordant	Strains	RI Sets
Ms13-12	D9Mit8	5	27	SMXA
Ms13-34	D9Mit10	5	27	SMXA
Ms13-5	D9Mit14	6	27	SMXA

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Ms13-12	Ms13-24	5	28	6.098	3.376
Ms13-24	Ms13-34	13	28	38.235	25.568
Ms13-34	Ms13-5	14	28	50.000	37.796