Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  13
• Reference
  J:747 Holcombe RF, et al., Linkage of loci associated with two pigment mutations on mouse chromosome 13. Genet Res. 1991 Aug;58(1):41-50
• ID
  MGI:45291

Genes

Gene	Assay Type	Description
Lyst	visible phenotype
Tcrg-C	Southern analysis	Tcrg-C probe
Prl	Southern analysis	pIT200
Fim1	Southern analysis	167-PP15
Dhfr	Southern analysis	pdhfr3.2
Gzma	Southern analysis	Ctla3 cDNA

Notes

• Reference
  A recombination between loci reported for this reference are recorded in both the summary haplotype data and in the 2x2 recombination tables. Authors use Muhf instead of Ctla3.
• Experiment
  Only female progeny listed.

CROSS

• Type
  Backcross, sexes unspecified or combined
• Female Parent
  <b> <b> <b> <b> <b> <b>/<w> <w> <w> <w> <w> <w>
• Strain
  (STOCK Kit Lyst x PWK)F1
• Male Parent
  <b> <b> <b> <b> <b> <b>/<b> <b> <b> <b> <b> <b>
• Strain
  B6.C3Rl-Lyst
• Allele 1
  b from STOCK Kit Lyst
• Allele 2
  w from PWK

2x2 Data Reported

Marker 1	Marker 2	# Recombinants	# Parentals
Lyst	Tcrg-C	1	60
Lyst	Prl	2	55
Lyst	Fim1	3	37
Lyst	Dhfr	10	10
Lyst	Gzma	10	16
Tcrg-C	Prl	1	56
Tcrg-C	Fim1	2	38
Tcrg-C	Dhfr	9	11
Tcrg-C	Gzma	15	19
Prl	Fim1	1	38
Prl	Dhfr	9	9
Prl	Gzma	10	14
Fim1	Dhfr	2	8
Fim1	Gzma	5	8
Dhfr	Gzma	3	17

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Lyst	Tcrg-C	1	61	1.639	1.626
Lyst	Prl	2	57	3.509	2.437
Lyst	Fim1	3	40	7.500	4.165
Lyst	Dhfr	10	20	50.000	11.180
Lyst	Gzma	10	26	38.462	9.541
Tcrg-C	Prl	1	57	1.754	1.739
Tcrg-C	Fim1	2	40	5.000	3.446
Tcrg-C	Dhfr	9	20	45.000	11.124
Tcrg-C	Gzma	15	34	44.118	8.515
Prl	Fim1	1	39	2.564	2.531
Prl	Dhfr	9	18	50.000	11.785
Prl	Gzma	10	24	41.667	10.063
Fim1	Dhfr	2	10	20.000	12.649
Fim1	Gzma	5	13	38.462	13.493
Dhfr	Gzma	3	20	15.000	7.984