Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  8
• Reference
  J:28721 Gariboldi M, et al., Mapping of the Hmg1 gene and of seven related sequences in the mouse. Mamm Genome. 1995 Sep;6(9):581-5
• ID
  MGI:45909

Genes

Gene	Assay Type	Description
Hmgb1-rs9	Southern analysis	Hmg1end
D8Mit4	PCR amplified length variant	M71
Ms15-9	Southern analysis	probe 33.15
Hmgb1-rs10	Southern analysis	Hmg1end
D8Mit11	PCR amplified length variant	A105

Notes

• Experiment
  Offspring types indicate alleles inherited from F1 parent.
  

CROSS

• Type
  Backcross, female
• Female Parent
  <h> <h> <h> <h> <h>/<s> <s> <s> <s> <s>
• Strain
  (C3H/He x M. spretus)F1
• Male Parent
  <h> <h> <h> <h> <h>/<h> <h> <h> <h> <h>
• Strain
  C57BL/6J
• Allele 1
  h from C3H/He or C57BL/6J
• Allele 2
  s from M. spretus

CROSS Data

MC #mice	Hmgb1-rs9	D8Mit4	Ms15-9	Hmgb1-rs10	D8Mit11
34	h	h	h	h	h
25	s	s	s	s	s
4	s	h	h	h	h
5	h	s	s	s	s
12	s	s	h	h	h
10	h	h	s	s	s
6	s	s	s	h	h
5	h	h	h	s	s
0	s	s	s	s	h
0	h	h	h	h	s

Additional Mice Typed Only for Specific Pairs of Loci

Marker 1	Marker 2	# Recombinants	# Parentals
Hmgb1-rs9	D8Mit4	0	2
D8Mit4	Ms15-9	0	3
Ms15-9	Hmgb1-rs10	0	4
Ms15-9	D8Mit11	0	4

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Hmgb1-rs9	D8Mit4	9	103	8.738	2.782
D8Mit4	Ms15-9	22	104	21.154	4.005
Ms15-9	Hmgb1-rs10	11	105	10.476	2.989
Hmgb1-rs10	D8Mit11	0	101	0.000	0.000