Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  18
• Reference
  J:28721 Gariboldi M, et al., Mapping of the Hmg1 gene and of seven related sequences in the mouse. Mamm Genome. 1995 Sep;6(9):581-5
• ID
  MGI:45911

Genes

Gene	Assay Type	Description
D18Mit9	PCR amplified length variant	M209
D18Mit8	PCR amplified length variant	L24
Hmgb1-rs12	Southern analysis	Hmg1end
D18Int1	PCR amplified length variant	L62

Notes

• Experiment
  Offspring types indicate alleles inherited from F1 parent.
  

CROSS

• Type
  Backcross, female
• Female Parent
  <h> <h> <h> <h>/<s> <s> <s> <s>
• Strain
  (C3H/He x M. spretus)F1
• Male Parent
  <h> <h> <h> <h>/<h> <h> <h> <h>
• Strain
  C57BL/6J
• Allele 1
  h from C3H/He or C57BL/6J
• Allele 2
  s from M. spretus

CROSS Data

MC #mice	D18Mit9	D18Mit8	Hmgb1-rs12	D18Int1
35	h	h	h	h
30	s	s	s	s
2	s	h	h	h
1	h	s	s	s
0	s	s	h	h
0	h	h	s	s
8	s	s	s	h
4	h	h	h	s

Additional Mice Typed Only for Specific Pairs of Loci

Marker 1	Marker 2	# Recombinants	# Parentals
D18Mit9	Hmgb1-rs12	0	9
D18Mit9	D18Mit8	0	9
Hmgb1-rs12	D18Int1	1	20
D18Mit8	D18Int1	1	20

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
D18Mit9	D18Mit8	3	89	3.371	1.913
D18Mit8	Hmgb1-rs12	0	80	0.000	0.000
Hmgb1-rs12	D18Int1	13	101	12.871	3.332