Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  6
• Reference
  J:28829 Street VA, et al., Molecular genetic analysis of distal mouse chromosome 6 defines gene order and positions of the deafwaddler and opisthotonos mutations. Genomics. 1995 Sep 1;29(1):123-30
• ID
  MGI:45917

Genes

Gene	Assay Type
D6Mit102	PCR amplified length variant
D6Mit64	PCR amplified length variant
D6Mit39	PCR amplified length variant
D6Mit149	PCR amplified length variant
D6Mit192	PCR amplified length variant
D6Mit108	PCR amplified length variant
D6Mit107	PCR amplified length variant
D6Mit54	PCR amplified length variant
D6Mit23	PCR amplified length variant
D6Mit10	PCR amplified length variant
D6Mit11	PCR amplified length variant
Atp2b2	visible phenotype
D6Mit55	PCR amplified length variant
D6Mit63	PCR amplified length variant
D6Mit44	PCR amplified length variant
D6Mit12	PCR amplified length variant

Notes

• Experiment
  No recombinant haplotypes inferred for D6Mit39, D6Mit149, D6Mit192, D6Mit108, D6Mit107, D6Mit54, D6Mit23, D6Mit10, D6Mit55 and D6Mit63.F1 direction known.
  

CROSS

• Type
  Backcross, sexes unspecified or combined
• Female Parent
  <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c>/<b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>
• Strain
  (CAST/Ei +/+ x C3HeB/FeJ-Atp2b2 or Atp2b2/+)F1
• Male Parent
  <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>/<b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>
• Strain
  C3HeB/FeJ
• Allele 1
  c from CAST/EiJ
• Allele 2
  b from C3HeB/FeJ

2x2 Data Reported

Marker 1	Marker 2	# Recombinants	# Parentals
D6Mit102	D6Mit64	5	93
D6Mit64	D6Mit39	1	378
D6Mit64	D6Mit149	1	378
D6Mit64	D6Mit192	1	378
D6Mit39	D6Mit108	7	372
D6Mit39	D6Mit107	7	372
D6Mit39	D6Mit54	7	372
D6Mit39	D6Mit23	7	372
D6Mit149	D6Mit108	7	372
D6Mit149	D6Mit107	7	372
D6Mit149	D6Mit54	7	372
D6Mit149	D6Mit23	7	372
D6Mit192	D6Mit108	7	372
D6Mit192	D6Mit107	7	372
D6Mit192	D6Mit54	7	372
D6Mit192	D6Mit23	7	372
D6Mit108	D6Mit10	2	377
D6Mit107	D6Mit10	2	377
D6Mit54	D6Mit10	2	377
D6Mit23	D6Mit10	2	377
D6Mit10	D6Mit11	2	377
D6Mit11	Atp2b2	1	378
Atp2b2	D6Mit55	2	377
Atp2b2	D6Mit63	2	377
D6Mit55	D6Mit44	6	373
D6Mit63	D6Mit44	6	373
D6Mit44	D6Mit12	15	283

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
D6Mit102	D6Mit64	5	98	5.102	2.223
D6Mit64	D6Mit39	1	379	0.264	0.264
D6Mit64	D6Mit149	1	379	0.264	0.264
D6Mit64	D6Mit192	1	379	0.264	0.264
D6Mit39	D6Mit108	7	379	1.847	0.692
D6Mit39	D6Mit107	7	379	1.847	0.692
D6Mit39	D6Mit54	7	379	1.847	0.692
D6Mit39	D6Mit23	7	379	1.847	0.692
D6Mit149	D6Mit108	7	379	1.847	0.692
D6Mit149	D6Mit107	7	379	1.847	0.692
D6Mit149	D6Mit54	7	379	1.847	0.692
D6Mit149	D6Mit23	7	379	1.847	0.692
D6Mit192	D6Mit108	7	379	1.847	0.692
D6Mit192	D6Mit107	7	379	1.847	0.692
D6Mit192	D6Mit54	7	379	1.847	0.692
D6Mit192	D6Mit23	7	379	1.847	0.692
D6Mit108	D6Mit10	2	379	0.528	0.372
D6Mit107	D6Mit10	2	379	0.528	0.372
D6Mit54	D6Mit10	2	379	0.528	0.372
D6Mit23	D6Mit10	2	379	0.528	0.372
D6Mit10	D6Mit11	2	379	0.528	0.372
D6Mit11	Atp2b2	1	379	0.264	0.264
Atp2b2	D6Mit55	2	379	0.528	0.372
Atp2b2	D6Mit63	2	379	0.528	0.372
D6Mit55	D6Mit44	6	379	1.583	0.641
D6Mit63	D6Mit44	6	379	1.583	0.641
D6Mit44	D6Mit12	15	298	5.034	1.267