Mapping Data

Experiment

• Experiment
  RI
• Chromosome
  4
• Reference
  J:31555 Stassen AP, et al., Genetic composition of the recombinant congenic strains. Mamm Genome. 1996 Jan;7(1):55-8
• ID
  MGI:46489

Genes

Gene	Assay Type
D4Mit149	PCR amplified length variant
D4Mit18	PCR amplified length variant
D4Mit19	PCR amplified length variant
D4Mit172	PCR amplified length variant
D4Mit39	PCR amplified length variant
D4Mit4	PCR amplified length variant
D4Mit23	PCR amplified length variant
D4Mit55	PCR amplified length variant
D4Mit6	PCR amplified length variant
D4Mit17	PCR amplified length variant
D4Mit164	PCR amplified length variant
D4Mit7	PCR amplified length variant
D4Mit152	PCR amplified length variant
D4Mit27	PCR amplified length variant
D4Mit45	PCR amplified length variant
D4Mit77	PCR amplified length variant
D4Mit145	PCR amplified length variant
D4Mit9	PCR amplified length variant
D4Mit28	PCR amplified length variant
D4Mit167	PCR amplified length variant
D4Mit31	PCR amplified length variant
D4Mit168	PCR amplified length variant
D4Mit37	PCR amplified length variant
D4Mit11	PCR amplified length variant
D4Nds2	PCR amplified length variant
D4Mit70	PCR amplified length variant
D4Mit13	PCR amplified length variant
D4Mit32	PCR amplified length variant
D4Mit129	PCR amplified length variant
D4Mit190	PCR amplified length variant
D4Mit42	PCR amplified length variant
D17Mit1009	PCR amplified length variant
D4Mit131	PCR amplified length variant
D4Mit59	PCR amplified length variant
D4Nds3	PCR amplified length variant
Mtv17	PCR amplified length variant
Cd72	PCR amplified length variant
Mup1	PCR amplified length variant
Tyrp1	PCR amplified length variant
Mpmv19	PCR amplified length variant

Notes

• Reference
  D3Mit371 mapped on Chromosome 3 in this reference has since been withdrawn to equal D5Mit123 on Chromosome 5.

RI

• Origin
  BALB/cHeA x STS/A
• Designation
  CcS
• Abbreviation 1
  C
• Abbreviation 2
  S

RI Data (columns show RI Lines sampled)

Marker	1	2	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20
D4Mit149	S	C	C	C	C	C	C	C	C	C	C	C	C	C	S	C	C	C	C	S
D4Mit18	S	C	C	C	C	C	C	C	C	C	C	C	C	C	S	C	C	C	C	C
D4Mit19	S	C	C	C	C	C	C	C	C	C	C	C	C	C	S	C	C	C	C	C
D4Mit172	S	C	C	C	C	C	C	C	S	.	.	C	C	C	S	C	C	C	C	.
D4Mit39	S	C	C	C	C	C	C	C	S	C	C	C	C	C	S	C	.	C	.	C
D4Mit4	C	C	C	C	C	C	C	C	S	C	C	C	C	C	S	C	C	C	C	C
D4Mit23	C	C	C	C	C	C	C	.	S	S	C	C	C	C	S	C	C	C	C	C
D4Mit55	C	C	C	C	C	C	C	C	S	S	C	C	C	C	S	C	C	C	C	C
D4Mit6	C	C	C	C	C	C	C	C	S	.	.	C	C	C	S	.	C	C	C	.
D4Mit17	C	C	S	C	C	C	C	C	S	S	C	C	C	C	C	C	C	C	C	C
D4Mit164	C	C	S	C	C	C	C	C	S	S	C	C	C	C	C	C	C	C	C	C
D4Mit7	C	C	S	C	C	C	C	C	S	S	C	C	C	C	C	C	C	.	C	C
D4Mit152	C	C	C	C	C	C	C	C	S	S	C	C	C	C	C	C	C	C	C	.
D4Mit27	C	C	C	C	C	C	C	C	C	S	C	Z	C	C	C	S	C	C	C	C
D4Mit45	C	C	C	C	C	C	C	C	C	S	C	C	C	C	C	C	C	C	C	C
D4Mit77	C	C	C	C	C	C	C	C	S	C	C	C	C	C	C	S	C	C	C	.
D4Mit145	C	C	C	C	C	C	C	C	C	.	.	C	C	C	C	S	C	C	C	.
D4Mit9	C	C	C	C	C	C	C	C	C	S	C	C	C	C	C	S	C	C	C	C
D4Mit28	C	C	C	C	C	C	C	C	C	S	C	C	C	C	C	C	C	C	C	C
D4Mit167	C	C	C	C	C	.	.	C	C	S	C	C	C	.	.	C	C	C	C	.
D4Mit31	C	C	C	C	C	C	C	C	C	S	C	C	C	C	C	C	C	C	C	C
D4Mit168	X	C	C	C	C	C	X	C	C	S	C	C	C	C	C	C	C	C	C	.
D4Mit37	C	C	C	C	C	C	C	C	C	S	C	C	C	C	C	C	C	C	C	C
D4Mit11	C	C	C	C	C	C	C	C	C	S	C	C	C	C	C	.	C	C	S	C
D4Nds2	C	C	C	C	C	C	C	C	C	S	C	C	C	C	C	S	C	C	S	C
D4Mit70	C	C	C	C	C	C	C	C	C	S	C	C	C	C	C	C	C	C	C	.
D4Mit13	C	S	C	C	C	C	C	C	C	S	C	C	C	Z	C	C	C	S	C	C
D4Mit32	C	S	C	C	C	C	C	C	C	S	C	C	C	C	C	C	C	S	C	C
D4Mit129	C	S	C	C	C	C	C	C	S	C	C	C	C	S	C	C	C	S	C	.
D4Mit190	C	S	C	C	C	C	C	C	C	.	.	C	C	S	C	C	S	S	C	C
D4Mit42	S	Z	C	C	C	C	C	C	C	S	C	C	C	Z	C	C	Z	S	Z	C
D17Mit1009	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C
D4Mit131	S	S	C	C	C	C	C	C	C	S	C	C	C	S	C	C	S	S	C	C
D4Mit59	S	S	C	C	C	C	C	C	C	S	C	C	C	S	C	C	S	S	C	C
D4Nds3	S	C	C	C	C	C	C	C	S	C	C	C	C	C	S	C	C	C	C	C
Mtv17	C	C	C	C	C	C	C	C	S	S	C	C	C	C	S	C	C	C	C	C
Cd72	C	C	C	C	C	C	C	C	S	S	C	C	C	C	S	C	C	C	C	C
Mup1	C	C	S	C	C	C	C	C	S	S	C	C	C	C	C	C	C	C	C	.
Tyrp1	C	C	C	C	C	C	C	C	S	S	C	C	C	C	C	C	C	C	C	C
Mpmv19	C	C	C	C	C	C	C	C	C	S	C	C	C	C	C	C	C	C	S	C

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
D4Mit149	D4Mit18	1	20	1.351	1.424
D4Mit18	D4Mit19	0	20	0.000	0.000
D4Mit19	D4Mit172	1	17	1.613	1.716
D4Mit172	D4Mit39	0	15	0.000	0.000
D4Mit39	D4Mit4	1	18	1.515	1.606
D4Mit4	D4Mit23	1	19	1.429	1.510
D4Mit23	D4Mit55	0	19	0.000	0.000
D4Mit55	D4Mit6	0	16	0.000	0.000
D4Mit6	D4Mit17	2	16	3.846	3.131
D4Mit17	D4Mit164	0	20	0.000	0.000
D4Mit164	D4Mit7	0	19	0.000	0.000
D4Mit7	D4Mit152	1	18	1.515	1.606
D4Mit152	D4Mit27	3	19	5.172	3.591
D4Mit27	D4Mit45	2	20	2.941	2.321
D4Mit45	D4Mit77	3	19	5.172	3.591
D4Mit77	D4Mit145	1	17	1.613	1.716
D4Mit145	D4Mit9	0	17	0.000	0.000
D4Mit9	D4Mit28	1	20	1.351	1.424
D4Mit28	D4Mit167	0	15	0.000	0.000
D4Mit167	D4Mit31	0	15	0.000	0.000
D4Mit31	D4Mit168	2	19	3.125	2.482
D4Mit168	D4Mit37	2	19	3.125	2.482
D4Mit37	D4Mit11	1	19	1.429	1.510
D4Mit11	D4Nds2	0	19	0.000	0.000
D4Nds2	D4Mit70	2	19	3.125	2.482
D4Mit70	D4Mit13	3	19	5.172	3.591
D4Mit13	D4Mit32	1	20	1.351	1.424
D4Mit32	D4Mit129	3	19	5.172	3.591
D4Mit129	D4Mit190	2	17	3.571	2.881
D4Mit190	D4Mit42	5	18	11.905	7.756
D4Mit42	D17Mit1009	7	20	18.421	11.818
D17Mit1009	D4Mit131	6	20	13.636	8.469
D4Mit131	D4Mit59	0	20	0.000	0.000
D4Mit59	D4Nds3	7	20	18.421	11.818
D4Nds3	Mtv17	2	20	2.941	2.321
Mtv17	Cd72	0	20	0.000	0.000
Cd72	Mup1	2	19	3.125	2.482
Mup1	Tyrp1	1	19	1.429	1.510
Tyrp1	Mpmv19	2	20	2.941	2.321