Mapping Data

Experiment

• Experiment
  RI
• Chromosome
  5
• Reference
  J:31555 Stassen AP, et al., Genetic composition of the recombinant congenic strains. Mamm Genome. 1996 Jan;7(1):55-8
• ID
  MGI:46490

Genes

Gene	Assay Type
D5Mit49	PCR amplified length variant
D5Mit179	PCR amplified length variant
D5Mit13	PCR amplified length variant
D5Mit11	PCR amplified length variant
D5Mit52	PCR amplified length variant
D5Mit54	PCR amplified length variant
D5Mit55	PCR amplified length variant
D5Mit183	PCR amplified length variant
D5Mit112	PCR amplified length variant
D5Mit114	PCR amplified length variant
D5Mit6	PCR amplified length variant
D5Mit12	PCR amplified length variant
D5Nds4	PCR amplified length variant
D5Mit7	PCR amplified length variant
D5Mit20	PCR amplified length variant
D5Mit10	PCR amplified length variant
D5Mit175	PCR amplified length variant
D5Mit24	PCR amplified length variant
D5Mit25	PCR amplified length variant
D5Mit26	PCR amplified length variant
D5Mit27	PCR amplified length variant
D5Mit29	PCR amplified length variant
D5Mit164	PCR amplified length variant
D5Mit63	PCR amplified length variant
D5Mit31	PCR amplified length variant
D5Mit46	PCR amplified length variant
D5Mit60	PCR amplified length variant
D5Mit191	PCR amplified length variant
D5Mit143	PCR amplified length variant
Gusb	PCR amplified length variant
Pde6b	PCR amplified length variant
Pgm2	PCR amplified length variant
Dao	PCR amplified length variant

Notes

• Reference
  D3Mit371 mapped on Chromosome 3 in this reference has since been withdrawn to equal D5Mit123 on Chromosome 5.

RI

• Origin
  BALB/cHeA x STS/A
• Designation
  CcS
• Abbreviation 1
  C
• Abbreviation 2
  S

RI Data (columns show RI Lines sampled)

Marker	1	2	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20
D5Mit49	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C
D5Mit179	C	S	C	S	C	C	C	S	C	C	C	C	C	C	C	C	C	C	C	C
D5Mit13	C	C	C	Z	C	C	C	.	C	C	C	C	C	C	C	C	C	C	C	C
D5Mit11	C	C	C	Z	C	C	C	C	C	C	C	C	C	C	C	X	C	C	C	C
D5Mit52	C	C	C	C	C	.	C	C	C	C	C	C	C	C	C	C	C	.	C	.
D5Mit54	C	C	C	C	C	S	C	C	C	C	C	C	C	C	C	C	C	C	C	C
D5Mit55	C	C	C	C	C	S	C	C	C	C	C	C	C	C	C	C	C	C	C	S
D5Mit183	C	C	C	C	C	S	C	C	C	C	C	C	C	C	C	C	C	C	C	S
D5Mit112	C	C	C	C	S	S	C	C	C	C	C	C	C	C	C	C	C	C	C	S
D5Mit114	C	C	C	C	C	S	C	C	C	C	C	C	C	C	C	C	C	C	C	.
D5Mit6	C	C	C	C	C	S	C	C	C	C	C	C	C	C	C	C	C	C	C	S
D5Mit12	C	C	C	C	C	S	C	C	C	C	C	C	C	C	C	C	C	C	C	S
D5Nds4	C	C	C	C	C	S	C	C	C	C	C	C	C	C	C	C	C	C	C	S
D5Mit7	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	S
D5Mit20	.	C	C	C	C	C	C	C	C	C	C	C	.	C	C	C	C	Z	C	S
D5Mit10	C	C	C	C	C	C	C	C	C	C	C	C	S	C	C	C	C	C	C	S
D5Mit175	C	C	C	C	C	C	C	C	C	S	C	C	S	C	C	C	C	C	C	S
D5Mit24	C	C	C	C	C	C	C	C	S	S	C	C	S	C	C	C	C	C	C	S
D5Mit25	C	C	C	C	C	C	C	C	C	C	C	C	S	C	C	C	C	C	C	C
D5Mit26	.	C	C	C	C	C	C	C	C	S	C	C	.	C	C	C	C	C	C	S
D5Mit27	C	S	C	C	S	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C
D5Mit29	C	S	S	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	S
D5Mit164	C	S	S	C	S	C	C	C	C	C	C	C	C	C	C	C	C	C	C	.
D5Mit63	C	C	S	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	S
D5Mit31	X	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C
D5Mit46	.	.	C	C	C	C	C	C	C	Z	C	C	C	C	C	C	C	C	C	C
D5Mit60	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C
D5Mit191	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C
D5Mit143	C	C	C	C	C	C	C	C	S	C	C	C	S	C	C	C	C	C	C	S
Gusb	C	S	Z	C	Z	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C
Pde6b	C	C	C	C	C	C	C	C	C	S	C	C	S	C	C	C	C	C	C	S
Pgm2	C	C	C	C	S	S	C	C	C	C	C	C	C	C	C	C	C	C	C	.
Dao	C	C	C	C	C	C	C	C	C	S	C	C	S	C	C	C	C	C	C	.

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
D5Mit49	D5Mit179	3	20	4.839	3.323
D5Mit179	D5Mit13	2	19	3.125	2.482
D5Mit13	D5Mit11	1	19	1.429	1.510
D5Mit11	D5Mit52	2	17	3.571	2.881
D5Mit52	D5Mit54	0	17	0.000	0.000
D5Mit54	D5Mit55	1	20	1.351	1.424
D5Mit55	D5Mit183	0	20	0.000	0.000
D5Mit183	D5Mit112	1	20	1.351	1.424
D5Mit112	D5Mit114	1	19	1.429	1.510
D5Mit114	D5Mit6	0	19	0.000	0.000
D5Mit6	D5Mit12	0	20	0.000	0.000
D5Mit12	D5Nds4	0	20	0.000	0.000
D5Nds4	D5Mit7	1	20	1.351	1.424
D5Mit7	D5Mit20	1	18	1.515	1.606
D5Mit20	D5Mit10	1	18	1.515	1.606
D5Mit10	D5Mit175	1	20	1.351	1.424
D5Mit175	D5Mit24	1	20	1.351	1.424
D5Mit24	D5Mit25	3	20	4.839	3.323
D5Mit25	D5Mit26	2	18	3.333	2.667
D5Mit26	D5Mit27	4	18	8.333	5.512
D5Mit27	D5Mit29	3	20	4.839	3.323
D5Mit29	D5Mit164	1	19	1.429	1.510
D5Mit164	D5Mit63	2	19	3.125	2.482
D5Mit63	D5Mit31	3	20	4.839	3.323
D5Mit31	D5Mit46	1	18	1.515	1.606
D5Mit46	D5Mit60	1	18	1.515	1.606
D5Mit60	D5Mit191	0	20	0.000	0.000
D5Mit191	D5Mit143	3	20	4.839	3.323
D5Mit143	Gusb	6	20	13.636	8.469
Gusb	Pde6b	6	20	13.636	8.469
Pde6b	Pgm2	4	19	7.692	4.995
Pgm2	Dao	4	19	7.692	4.995