Mapping Data

Experiment

• Experiment
  RI
• Chromosome
  7
• Reference
  J:31555 Stassen AP, et al., Genetic composition of the recombinant congenic strains. Mamm Genome. 1996 Jan;7(1):55-8
• ID
  MGI:46492

Genes

Gene	Assay Type
D7Mit74a	PCR amplified length variant
D7Mit75	PCR amplified length variant
D7Mit57	PCR amplified length variant
D7Mit22	PCR amplified length variant
D7Mit117	PCR amplified length variant
D7Mit55	PCR amplified length variant
D7Mit25	PCR amplified length variant
D7Mit54	PCR amplified length variant
D7Nds5	PCR amplified length variant
D7Mit26	PCR amplified length variant
D7Mit18	PCR amplified length variant
D7Mit120	PCR amplified length variant
D7Mit160	PCR amplified length variant
D7Nds2	PCR amplified length variant
D7Nds1	PCR amplified length variant
D7Mit31	PCR amplified length variant
D7Mit32a	PCR amplified length variant
D7Mit7	PCR amplified length variant
D7Mit8	PCR amplified length variant
D7Mit9	PCR amplified length variant
D7Mit164	PCR amplified length variant
D7Mit67	PCR amplified length variant
D5Mit1005	PCR amplified length variant
D7Mit10	PCR amplified length variant
D7Mit14	PCR amplified length variant
D7Mit15	PCR amplified length variant
D7Nds4	PCR amplified length variant
D7Mit47	PCR amplified length variant
D7Mit142	PCR amplified length variant
D7Nds6	PCR amplified length variant
Gpi1	PCR amplified length variant
Prt4	PCR amplified length variant
Mpmv1	PCR amplified length variant
Itgal	PCR amplified length variant
Fgf3	PCR amplified length variant

Notes

• Reference
  D3Mit371 mapped on Chromosome 3 in this reference has since been withdrawn to equal D5Mit123 on Chromosome 5.

RI

• Origin
  BALB/cHeA x STS/A
• Designation
  CcS
• Abbreviation 1
  C
• Abbreviation 2
  S

RI Data (columns show RI Lines sampled)

Marker	1	2	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20
D7Mit74a	C	S	C	C	C	C	S	S	C	C	C	C	C	C	C	C	C	.	C	.
D7Mit75	X	.	C	C	X	C	C	C	C	X	C	.	C	C	X	C	C	C	C	C
D7Mit57	C	S	C	C	C	C	S	S	C	C	C	C	C	C	C	C	C	C	C	C
D7Mit22	C	.	C	C	C	C	S	S	C	C	C	C	C	S	C	C	C	C	C	C
D7Mit117	C	S	S	C	C	C	S	C	C	C	C	S	C	C	C	C	C	C	X	C
D7Mit55	C	S	Z	C	C	C	S	C	C	C	S	S	C	C	C	C	C	C	C	C
D7Mit25	C	C	C	C	C	C	S	C	C	C	S	C	C	C	C	C	C	C	C	C
D7Mit54	C	C	C	C	C	C	S	C	C	C	S	C	C	C	C	C	C	C	C	C
D7Nds5	C	C	C	C	C	S	S	C	C	C	S	C	C	C	C	C	C	C	C	C
D7Mit26	C	C	C	C	C	S	S	C	C	C	S	C	C	C	C	C	C	C	C	C
D7Mit18	C	.	C	C	C	S	S	C	C	C	S	C	C	C	C	C	C	C	C	C
D7Mit120	C	C	C	C	C	S	S	C	C	C	S	C	C	C	C	.	C	.	C	C
D7Mit160	C	C	C	C	C	S	S	C	C	C	S	C	C	C	C	C	C	C	C	C
D7Nds2	C	C	C	C	C	S	C	C	C	C	S	C	C	C	C	C	C	C	C	C
D7Nds1	C	C	C	C	C	S	C	C	C	C	S	C	C	C	C	C	C	C	C	C
D7Mit31	C	C	C	C	C	S	C	C	C	C	S	C	C	C	Z	C	C	C	C	C
D7Mit32a	C	.	.	C	C	S	C	C	.	C	S	.	C	C	.	C	C	C	C	C
D7Mit7	C	C	C	C	C	S	C	C	C	C	S	C	C	C	C	C	C	C	C	C
D7Mit8	C	C	C	C	C	S	C	C	C	C	S	C	C	C	C	C	C	C	C	C
D7Mit9	C	C	S	C	C	S	C	C	C	C	S	C	C	C	C	C	C	C	C	C
D7Mit164	C	C	S	C	C	S	C	C	C	C	S	C	C	C	C	C	C	C	C	C
D7Mit67	C	C	S	C	C	S	C	C	C	C	S	C	C	C	S	.	S	C	S	C
D5Mit1005	C	C	C	.	S	C	C	C	C	.	C	C	S	C	C	C	C	C	C	C
D7Mit10	C	C	S	C	C	C	C	C	C	C	S	C	C	C	S	C	C	C	S	C
D7Mit14	C	C	Z	C	C	C	C	C	C	C	Z	C	.	C	C	C	C	C	S	C
D7Mit15	C	C	S	C	C	C	C	C	C	C	Z	C	C	C	C	C	C	C	S	C
D7Nds4	C	C	S	C	C	C	C	C	C	C	S	C	C	C	C	C	C	C	S	C
D7Mit47	C	C	S	C	C	C	C	C	C	C	S	C	C	C	C	C	C	C	S	C
D7Mit142	.	.	.	.	.	.	C	.	.	.	C	.	.	.	.	.	.	.	.	.
D7Nds6	C	S	C	C	C	C	S	S	C	C	C	C	C	C	C	C	C	C	C	C
Gpi1	C	S	Z	C	C	C	Z	C	C	C	S	S	C	C	C	C	C	C	C	.
Prt4	C	C	C	Z	Z	S	S	C	C	C	S	C	C	C	C	C	C	C	C	.
Mpmv1	C	C	C	C	C	S	S	C	C	C	S	C	C	C	C	C	C	C	C	C
Itgal	C	C	Z	C	C	S	C	C	C	C	S	C	C	C	Z	C	S	C	S	C
Fgf3	C	C	Z	C	C	C	C	C	C	C	Z	C	C	C	C	C	C	C	S	C

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
D7Mit74a	D7Mit75	6	16	21.429	15.808
D7Mit75	D7Mit57	6	18	16.667	11.111
D7Mit57	D7Mit22	1	19	1.429	1.510
D7Mit22	D7Mit117	5	19	10.870	6.894
D7Mit117	D7Mit55	3	20	4.839	3.323
D7Mit55	D7Mit25	3	20	4.839	3.323
D7Mit25	D7Mit54	0	20	0.000	0.000
D7Mit54	D7Nds5	1	20	1.351	1.424
D7Nds5	D7Mit26	0	20	0.000	0.000
D7Mit26	D7Mit18	0	19	0.000	0.000
D7Mit18	D7Mit120	0	17	0.000	0.000
D7Mit120	D7Mit160	0	18	0.000	0.000
D7Mit160	D7Nds2	1	20	1.351	1.424
D7Nds2	D7Nds1	0	20	0.000	0.000
D7Nds1	D7Mit31	1	20	1.351	1.424
D7Mit31	D7Mit32a	0	15	0.000	0.000
D7Mit32a	D7Mit7	0	15	0.000	0.000
D7Mit7	D7Mit8	0	20	0.000	0.000
D7Mit8	D7Mit9	1	20	1.351	1.424
D7Mit9	D7Mit164	0	20	0.000	0.000
D7Mit164	D7Mit67	3	19	5.172	3.591
D7Mit67	D5Mit1005	8	17	40.000	34.986
D5Mit1005	D7Mit10	6	18	16.667	11.111
D7Mit10	D7Mit14	3	19	5.172	3.591
D7Mit14	D7Mit15	1	19	1.429	1.510
D7Mit15	D7Nds4	1	20	1.351	1.424
D7Nds4	D7Mit47	0	20	0.000	0.000
D7Mit47	D7Mit142	1	2	50.000	141.421
D7Mit142	D7Nds6	1	2	50.000	141.421
D7Nds6	Gpi1	5	19	10.870	6.894
Gpi1	Prt4	7	19	20.588	13.824
Prt4	Mpmv1	2	19	3.125	2.482
Mpmv1	Itgal	5	20	10.000	6.197
Itgal	Fgf3	4	20	7.143	4.563