Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  1
• Reference
  J:33375 Fleming J, et al., The Sp4H deletion may contain a new locus essential for postimplantation development. Genomics. 1996 Jun 1;34(2):205-12
• ID
  MGI:46741

Genes

Gene	Assay Type	Description
Vil1	Southern analysis	Vil probe
D1Mit46	PCR amplified length variant
Pax3	Southern analysis	Pax3 probe1
D1Mit79	PCR amplified length variant
D1Mit132	PCR amplified length variant
D1Mit134	PCR amplified length variant
D1Mit253	PCR amplified length variant
D1Mit332	PCR amplified length variant
D1Mcg153	Southern analysis	[l]Mm1C-153
D1Mcg156	Southern analysis	[l]Mm1C-156
D1Mit8	PCR amplified length variant
D1Mit9	PCR amplified length variant
D1Mit44	PCR amplified length variant
D1Mit183	PCR amplified length variant
D1Ler3	Southern analysis	D1Ler3 genomic
D1Mit53	PCR amplified length variant
D1Mit82	PCR amplified length variant
D1Mit182	PCR amplified length variant
Bcl2	PCR amplified length variant	24.MMBCL.2

Notes

• Experiment
  Only F1 progeny showing a clear belly spot, indicating the presence of the Pax3^Sp-4H allele were backcrossed to CBA/Ca. Allele symbol p equals parental.

CROSS

• Type
  Backcross, sexes unspecified or combined
• Female Parent
  <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>/<c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c>
• Strain
  (C57BL/6J-Pax3/+ x CBA/Ca)F1
• Male Parent
  <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c>/<c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c>
• Strain
  CBA/Ca
• Allele 1
  b from C57BL/6J-Pax3
• Allele 2
  c from CBA/Ca

CROSS Data

MC #mice	Vil1	D1Mit46	Pax3	D1Mit79	D1Mit132	D1Mit134	D1Mit253	D1Mit332	D1Mcg153	D1Mcg156	D1Mit8	D1Mit9	D1Mit44	D1Mit183	D1Ler3	D1Mit53	D1Mit82	D1Mit182	Bcl2
2	c	c	b	b	b	b	b	b	b	b	b	b	b	b	b	b	b	b	b
98	p	p	p	p	p	p	p	p	p	p	p	p	p	p	p	p	p	p	p
2	b	b	b	b	b	b	b	b	b	b	c	c	c	c	c	c	c	c	c
1	b	b	b	b	b	b	b	b	b	b	b	b	b	b	b	c	c	c	c
8	b	b	b	b	b	b	b	b	b	b	b	b	b	b	b	b	b	b	c

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Vil1	D1Mit46	0	111	0.000	0.000
D1Mit46	Pax3	2	111	1.802	1.263
Pax3	D1Mit79	0	111	0.000	0.000
D1Mit79	D1Mit132	0	111	0.000	0.000
D1Mit132	D1Mit134	0	111	0.000	0.000
D1Mit134	D1Mit253	0	111	0.000	0.000
D1Mit253	D1Mit332	0	111	0.000	0.000
D1Mit332	D1Mcg153	0	111	0.000	0.000
D1Mcg153	D1Mcg156	0	111	0.000	0.000
D1Mcg156	D1Mit8	2	111	1.802	1.263
D1Mit8	D1Mit9	0	111	0.000	0.000
D1Mit9	D1Mit44	0	111	0.000	0.000
D1Mit44	D1Mit183	0	111	0.000	0.000
D1Mit183	D1Ler3	0	111	0.000	0.000
D1Ler3	D1Mit53	1	111	0.901	0.897
D1Mit53	D1Mit82	0	111	0.000	0.000
D1Mit82	D1Mit182	0	111	0.000	0.000
D1Mit182	Bcl2	8	111	7.207	2.455