Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  9
• Reference
  J:34472 Xia Y, et al., Assignment of the mouse ataxia-telangiectasia gene (Atm) to mouse chromosome 9. Mamm Genome. 1996 Jul;7(7):554-5
• ID
  MGI:47445

Genes

Gene	Assay Type	Description
Mmp3	Southern analysis	Mmp3 cDNA3
Gria4	reported elsewhere
Ldlr	reported elsewhere
D9Mit2	reported elsewhere
Pou2f3	reported elsewhere
Oaf	reported elsewhere
Drd2	reported elsewhere
Apoa1	reported elsewhere
D9Mit27	reported elsewhere
Cryab	reported elsewhere
Atm	Southern analysis	Atm cDNA1
Acat1	Southern analysis	pTZ18U
D9Ucla4	reported elsewhere
Lipc	reported elsewhere
D9Mit8	reported elsewhere
D9Ucla6	reported elsewhere
Slc38a3	reported elsewhere
D9Mit36	reported elsewhere
D9Ucla7	reported elsewhere
D9Mit19	reported elsewhere
D9Ucla3	reported elsewhere
D9Ucla5	reported elsewhere

Notes

• Reference
  Authors use Lipe for locus symbol Hpl. Data from this reference have been deposited in MGD under accession number MGD-CREX-652.

CROSS

• Type
  Backcross, female
• Female Parent
  <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>/<s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s>
• Strain
  (C57BL/6J x M. spretus)F1
• Male Parent
  <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>/<b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>
• Strain
  C57BL/6J
• Mapping Panel
  UCLA (BSB)
• Allele 1
  b from C57BL/6J
• Allele 2
  s from M. spretus

2x2 Data Reported

Marker 1	Marker 2	# Recombinants	# Parentals
Mmp3	Gria4	1	55
Gria4	Ldlr	5	59
Ldlr	D9Mit2	6	55
D9Mit2	Pou2f3	3	58
Pou2f3	Oaf	1	65
Oaf	Drd2	3	60
Drd2	Apoa1	0	63
Apoa1	D9Mit27	2	60
D9Mit27	Cryab	0	61
Cryab	Atm	0	61
Atm	Acat1	1	64
Acat1	D9Ucla4	5	61
D9Ucla4	Lipc	5	61
Lipc	D9Mit8	1	51
D9Mit8	D9Ucla6	9	41
D9Ucla6	Slc38a3	4	60
Slc38a3	D9Mit36	0	50
D9Mit36	D9Ucla7	3	47
D9Ucla7	D9Mit19	1	65
D9Mit19	D9Ucla3	1	64
D9Ucla3	D9Ucla5	1	63

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Mmp3	Gria4	1	56	1.786	1.770
Gria4	Ldlr	5	64	7.812	3.355
Ldlr	D9Mit2	6	61	9.836	3.813
D9Mit2	Pou2f3	3	61	4.918	2.769
Pou2f3	Oaf	1	66	1.515	1.504
Oaf	Drd2	3	63	4.762	2.683
Drd2	Apoa1	0	63	0.000	0.000
Apoa1	D9Mit27	2	62	3.226	2.244
D9Mit27	Cryab	0	61	0.000	0.000
Cryab	Atm	0	61	0.000	0.000
Atm	Acat1	1	65	1.538	1.527
Acat1	D9Ucla4	5	66	7.576	3.257
D9Ucla4	Lipc	5	66	7.576	3.257
Lipc	D9Mit8	1	52	1.923	1.904
D9Mit8	D9Ucla6	9	50	18.000	5.433
D9Ucla6	Slc38a3	4	64	6.250	3.026
Slc38a3	D9Mit36	0	50	0.000	0.000
D9Mit36	D9Ucla7	3	50	6.000	3.359
D9Ucla7	D9Mit19	1	66	1.515	1.504
D9Mit19	D9Ucla3	1	65	1.538	1.527
D9Ucla3	D9Ucla5	1	64	1.562	1.550