Mapping Data

Experiment

• Experiment
  RI
• Chromosome
  1
• Reference
  J:38297 Hughes DC, et al., Cloning and sequencing of the mouse Gli2 gene: localization to the Dominant hemimelia critical region. Genomics. 1997 Jan 15;39(2):205-15
• ID
  MGI:48040

Genes

Gene	Assay Type	Description
D1Mit11	reported elsewhere
D1Mit135	reported elsewhere
D1Mit163	reported elsewhere
D1Mit87	reported elsewhere
Emv17	reported elsewhere
D1Mit417	reported elsewhere
D1Mit258	reported elsewhere
D1Mit285	reported elsewhere
Gli2	PCR amplified length variant	Gli-pA, Gli-pB
D1Ncvs44	reported elsewhere
D1Ncvs45	reported elsewhere
D1Mit188	reported elsewhere
D1Mit389	reported elsewhere
D1Mit419	reported elsewhere
D1Mit217	reported elsewhere
En1	reported elsewhere
D1Mit88	reported elsewhere

RI

• Origin
  C57BL/6J x DBA/2J
• Designation
  BXD
• Abbreviation 1
  B
• Abbreviation 2
  D

RI Data (columns show RI Lines sampled)

Marker	1	2	5	6	8	9	11	12	13	14	15	16	18	19	20	21	22	23	24	25	27	28	29	30	31	32
D1Mit11	.	B	D	D	B	B	D	B	D	B	D	B	D	B	D	B	D	D	D	D	B	D	B	.	.	.
D1Mit135	.	B	D	D	B	B	D	B	D	B	D	B	D	B	D	B	D	D	D	B	B	D	B	D	B	D
D1Mit163	B	B	D	D	B	B	D	B	D	B	D	.	D	B	D	B	D	D	D	B	B	D	B	D	B	D
D1Mit87	B	B	D	D	B	B	D	B	D	B	D	D	D	B	D	B	D	D	D	B	B	D	B	D	B	D
Emv17	B	B	D	D	B	B	D	B	D	B	D	D	D	B	D	B	D	D	D	B	B	D	D	D	B	D
D1Mit417	B	B	D	D	B	B	D	B	D	B	D	D	D	B	D	B	D	D	D	B	B	D	D	D	B	D
D1Mit258	B	B	.	D	B	B	D	B	D	B	D	D	D	B	D	B	D	D	D	B	B	D	D	D	B	D
D1Mit285	B	B	D	D	B	B	D	B	D	B	D	D	D	B	D	B	D	D	D	B	B	D	D	D	B	D
Gli2	B	B	D	D	B	B	D	B	D	B	D	D	D	B	D	B	B	D	D	B	B	D	D	D	B	D
D1Ncvs44	B	B	D	D	B	B	D	B	D	B	D	D	D	B	D	B	B	D	D	B	B	D	D	D	B	D
D1Ncvs45	B	B	D	D	B	B	D	B	D	.	D	D	D	B	D	B	B	D	D	B	.	.	D	D	B	D
D1Mit188	B	B	D	D	B	B	D	B	D	B	D	D	D	B	D	B	B	D	D	B	B	.	D	D	B	D
D1Mit389	B	B	D	D	B	B	D	B	D	B	D	D	D	B	D	B	B	D	D	B	D	D	D	D	B	D
D1Mit419	B	B	D	D	B	B	D	B	D	B	D	D	D	B	D	B	B	D	D	B	D	D	D	D	B	D
D1Mit217	B	B	D	D	B	B	D	B	D	B	D	D	D	B	D	B	B	D	D	B	D	D	D	D	B	D
En1	B	B	D	D	B	B	D	B	D	B	D	D	D	B	D	B	B	D	D	B	D	D	D	D	B	D
D1Mit88	B	B	D	D	B	B	D	B	D	B	D	D	D	B	D	B	B	D	D	B	D	D	D	D	B	D

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
D1Mit11	D1Mit135	1	22	1.220	1.279
D1Mit135	D1Mit163	0	24	0.000	0.000
D1Mit163	D1Mit87	0	25	0.000	0.000
D1Mit87	Emv17	1	26	1.020	1.062
Emv17	D1Mit417	0	26	0.000	0.000
D1Mit417	D1Mit258	0	25	0.000	0.000
D1Mit258	D1Mit285	0	25	0.000	0.000
D1Mit285	Gli2	1	26	1.020	1.062
Gli2	D1Ncvs44	0	26	0.000	0.000
D1Ncvs44	D1Ncvs45	0	23	0.000	0.000
D1Ncvs45	D1Mit188	0	23	0.000	0.000
D1Mit188	D1Mit389	1	25	1.064	1.109
D1Mit389	D1Mit419	0	26	0.000	0.000
D1Mit419	D1Mit217	0	26	0.000	0.000
D1Mit217	En1	0	26	0.000	0.000
En1	D1Mit88	0	26	0.000	0.000