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Mapping Data
Experiment
  • Experiment
    TEXT-Physical Mapping
  • Chromosome
    17
  • Reference
    J:38062 Dagenais SL, et al., A physical map of the mouse H2 Bat5/Db interval. Mamm Genome. 1997 Jan;8(1):39-41
  • ID
    MGI:48119
Genes
GeneAlleleAssay TypeDescription
Abhd16a restriction analysis sd1.113, sd1.51, sd8.41
Gpank1 restriction analysis sd1.113, sd1.51, sd8.41
Bag6 restriction analysis sd8.41, sd1.121, sd1.361, sd24.441
Prrc2a restriction analysis sd1.121, sd1.361, sd24.441, sd10.24
D17Boy1 restriction analysis sd10.24, clone 3.1
Tnf restriction analysis clone 3.1, JW.1, clone 4.1
Lta restriction analysis clone 3.1, JW.1, clone 4.1
Ddx39b restriction analysis clone 28.3, clone 19.1, clone 37.1, clone 35.1
Bat1b restriction analysis clone 28.3, clone 19.1, clone 37.1, clone 35.1
H2-D1 restriction analysis clone 35.1
Notes
  • Reference
    Authors use Bat5, Bat4, Bat3, Bat2, B144, Tnfa, Tnfb and Bat1 for locus symbols D17H6S82E, D17H6S54E, D17H6S52E, D17H6S51E, D17Boy1, Tnf, Lta, and (D17H6S81E-1 D17H6S81E-2) respectively.
  • Experiment
    The following loci were physically ordered in 200kb of genomic DNA from C57BL/10SnCr as follows: D17H6S82E - G5b - 2410045D21Rik - 3110039B05Rik - D17Boy1 - Tnf - Lta - D17H6S81E-1 - D17H6S81E-2 - H2-D. Only 1kb separates D17H6S52E from D17H6S51E which are 24.9kb centromeric of D17Boy1. It is important to note that C57BL/RiJ carries the H2-Db haplotype. Other H2 haplotypes may differ in the interval spanning Bat5 to H2-D.

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
11/12/2024
MGI 6.24
The Jackson Laboratory