Mapping Data

Experiment

• Experiment
  TEXT-Physical Mapping
• Chromosome
  13
• Reference
  J:37707 Scharf JM, et al., The mouse region syntenic for human spinal muscular atrophy lies within the Lgn1 critical interval and contains multiple copies of Naip exon 5. Genomics. 1996 Dec 15;38(3):405-17
• ID
  MGI:48361

Genes

Gene	Assay Type	Description
Map1b	overlapping clones	361b12, 144c9
D13Mit36	overlapping clones	361b12, 144c9
D13Die4	overlapping clones	361b12, 418c3, 227a6, 144c9, 296f6
D13Die21	overlapping clones	361b12, 380d1, 418c3, 349d2, 461e12, 433a4, 227a6, 144c9, 296f6, 124a12
D13Die8	overlapping clones	361b12, 380d1, 418c3, 349d2, 461e12, 433a4, 461c9, 227a6, 144c9, 296f6, 124a12
D13Die5	overlapping clones	361b12, 380d1, 418c3, 349d2, 461e12, 433a4, 461c9, 227a6, 144c9, 334g7, 296f6, 124a12
D13Die20	overlapping clones	361b12, 380d1, 418c3, 349d2, 461e12, 433a4, 461c9, 227a6, 144c9, 334g7, 296f6, 124a12
D13Mit146	overlapping clones	361b12, 380d1, 418c3, 349d2, 461e12, 433a4, 461c9, 227a6, 144c9, 334g7, 296f6, 124a12, 18a12
D13Die9	overlapping clones	361b12, 380d1, 418c3, 349d2, 461e12, 433a4, 461c9, 227a6, 144c9, 334g7, 296f6, 124a12, 18a12
D13Die14	overlapping clones	361b12, 380d1, 418c3, 349d2, 461e12, 433a4, 461c9, 227a6, 144c9, 334g7, 296f6, 124a12, 18a12
D13Die15	overlapping clones	361b12, 380d1, 418c3, 349d2, 461e12, 433a4, 461c9, 227a6, 144c9, 334g7, 296f6, 124a12, 18a12
D13Die11	overlapping clones	361b12, 380d1, 418c3, 349d2, 461e12, 128h4, 433a4, 461c9, 227a6, 144c9, 296f6, 124a12, 18a12
D13Die22	overlapping clones	361b12, 380d1, 418c3, 349d2, 461e12, 128h4, 433a4, 461c9, 227a6, 144c9, 296f6, 124a12, 18a12
D13Die6	overlapping clones	386f2, 361b12, 380d1, 418c3, 349d2, 461e12, 128h4, 433a4, 461c9, 227a6, 144c9, 296f6, 124a12, 18a12
D13Die13	overlapping clones	386f2, 361b12, 380d1, 418c3, 349d2, 461e12, 128h4, 433a4, 461c9, 227a6, 144c9, 296f6, 124a12, 18a12
Smn1	overlapping clones	386f2, 361b12, 380d1, 418c3, 349d2, 461e12, 128h4, 433a4, 461c9, 227a6, 144c9, 296f6, 124a12, 18a12
D13Die23	overlapping clones	386f2, 380d1, 349d2, 461e12, 128h4, 433a4, 461c9, 227a6, 144c9, 296f6, 124a12, 18a12
D13Mit37b	overlapping clones	386f2, 380d1, 349d2, 461e12, 128h4, 433a4, 461c9, 227a6, 144c9, 296f6, 124a12, 18a12
D13Die7b	overlapping clones	386f2, 380d1, 349d2, 461e12, 128h4, 433a4, 223c1, 461c9, 227a6, 144c9, 296f6, 124a12, 18a12
D13Die1b	overlapping clones	386f2, 380d1, 349d2, 461e12, 128h4, 433a4, 223c1, 461c9, 227a6, 144c9, 296f6, 124a12, 18a12
D13Mit37a	overlapping clones	386f2, 380d1, 349d2, 461e12, 433a4, 223c1, 144a1, 461c9, 227a6, 144c9, 296f6, 124a12, 18a12
D13Die7a	overlapping clones	386f2, 349d2, 461e12, 433a4, 223c1,144a1, 461c9, 227a6, 144c9, 296f6, 124a12, 18a12
D13Die12	overlapping clones	386f2, 349d2, 461e12, 433a4, 223c1,144a1, 461c9, 227a6, 144c9, 296f6, 124a12, 18a12
D13Die1a	overlapping clones	386f2, 461e12, 433a4, 223c1, 144a1, 461c9, 227a6, 144c9, 296f6, 124a12, 18a12
D13Die3	overlapping clones	386f2, 461e12, 433a4, 223c1, 144a1, 461c9, 227a6, 144c9, 296f6, 124a12, 18a12
D13Mit203	overlapping clones	386f2, 461e12, 223c1, 144a1,461c9, 227a6, 144c9, 296f6, 124a12, 18a12
D13Die10	overlapping clones	386f2, 461e12, 223c1, 144a1, 46ac9, 227a6, 144c9, 296f6, 124a12, 18a12
Ccnb1	PCR amplified length variant	Ccnb1-F, Ccnb1-R

Notes

• Experiment
  A series of overlapping YAC clones were isolated to physically map the Lgn1 region on mouse Chromosome 13. The order of loci reported is: Mtap1b - D13Mit36 - D13Die4 - D13Die21 - D13Die8 - D13Die5 - D13Die20 - D13Mit146 - D13Die9 - D13Die14 - D13Die15 - D13Die11 - D13Die22 - D13Die6 - D13Die13 - Smn1 - D13Die23 - D13Mit37b - D13Die7b - D13Die1b - D13Mit37a - D13Die7a - D13Die12 - D13Die1a - D13Die3 - D13Mit203 - D13Die10 - Ccnb1.