Mapping Data

Experiment

• Experiment
  TEXT-QTL
• Chromosome
  13
• Reference
  J:188618 Thaisz J, et al., Genetic analysis of albuminuria in collaborative cross and multiple mouse intercross populations. Am J Physiol Renal Physiol. 2012 Oct;303(7):F972-81
• ID
  MGI:5638451

Genes

Gene	Assay Type
Albq15	visible phenotype

Notes

• Reference
  The Collaborative Cross (CC) is a large (~1,000 line) panel of recombinant inbred (RI) mouse strains being developed through a community effort (Churchill et al. 2004). The CC combines the genomes of eight genetically diverse founder strains - A/J, C57BL/6J, 129S1/SvImJ, NOD/ShiLtJ, NZO/HlLtJ, CAST/EiJ, PWK/PhJ, and WSB/EiJ - to capture nearly 90% of the known variation present in laboratory mice. CC strains are derived using a unique funnel breeding scheme. Once inbred, the RI CC lines can be used to generate thousands of potential 'outbred' but completely reproducible genomes through the generation of recombinant inbred crosses (RIX). The designation 'PreCC' is used to describe a mapping population of CC mice that is still at insipient stages of inbreeding.
  
  CTC (2004), Churchill, G. A., et al.. The Collaborative Cross, a community resource for the genetic analysis of complex traits. Nat Genet. 36, 1133-7.
  
  
• Experiment
  Linkage analysis was performed on 335 (C3H/HeJ x KK/HIJ)F2 intercross mice using 91 markers to identify QTL associated with albuminuria. Parental strain KK/HIJ exhibits higher incidence of albuminuria when compared to C3H/HeJ.
  
  QTL Albq15 maps to 37.4 - 84.8 Mb on Chromosome 13 with a peak LOD score of 3.86 at 36.7 cM in linkage with albuminuria. KK/HIJ alleles confer increased susceptibility to albuminuria.