Mapping Data

Experiment

• Experiment
  TEXT-QTL-Candidate Genes
• Chromosome
  1
• Reference
  J:289996 Noyes H, et al., Evidence for genes controlling resistance to Heligmosomoides bakeri on mouse chromosome 1. Parasitology. 2015 Apr;142(4):566-75
• ID
  MGI:6444827

Genes

Gene
Cd28
Ctla4

Notes

• Experiment
  Resistance to infections with Heligmosomoides bakeri is associated with a significant QTL on mouse chromosome 1 (Hbnr1; MGI:2660589).
  
  The authors exploited recombinant mice, with a segment of mouse chromosome 1 from susceptible C57Bl/10 mice introgressed onto mouse chromosome 1 in intermediate responder NOD mice (strains 1094 and 6109). BALB/c (intermediate responder) and C57Bl/6 mice (poor responder) were included as control strains and strain 1098 (B10 alleles on mouse chromosome 3) as NOD controls.
  
  BALB/c mice resisted infection rapidly and C57Bl/6 accumulated heavy worm burdens. Fecal egg counts dropped by weeks 1011 in strain 1098, but strains 1094 and 6109 continued to produce eggs, harbouring more worms when autopsied (day 77).
  
  PubMed search identified 3 genes (Ctla4, Cd28, Icos) as associated with Heligmosomoides in the B10 insert. Single nucleotide polymorphism (SNP) differences in Ctla4 could be responsible for regulatory changes in gene function, and a SNP within a splice site in Cd28 could have an impact on function, but no polymorphisms with predicted effects on function were found in Icos. Therefore, one or more genes encoded in the B10 insert into NOD mice contribute to the response phenotype, narrowing down the search for genes underlying the H. bakeri resistance QTL, and suggest Cd28 and Ctla4 as candidate genes.