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Tcf19 Gene Detail
Summary
  • Symbol
    Tcf19
  • Name
    transcription factor 19
  • Synonyms
    5730403J10Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:103180
    NCBI Gene: 106795
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:35823631-35827721 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 18.69 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_103180
 protein coding gene Chr17:35823627-35827730 (-)
129S1/SvImJ MGP_129S1SvImJ_G0023641
 protein coding gene Chr17:35681179-35685273 (-)
A/J MGP_AJ_G0023596
 protein coding gene Chr17:34583584-34587649 (-)
AKR/J MGP_AKRJ_G0023566
 protein coding gene Chr17:34986120-34990184 (-)
BALB/cJ MGP_BALBcJ_G0023601
 protein coding gene Chr17:34710448-34714513 (-)
C3H/HeJ MGP_C3HHeJ_G0023367
 protein coding gene Chr17:35454440-35458504 (-)
C57BL/6NJ MGP_C57BL6NJ_G0024043
 protein coding gene Chr17:37146093-37150183 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0021521
 protein coding gene Chr17:32284669-32288703 (-)
CAST/EiJ MGP_CASTEiJ_G0022858
 protein coding gene Chr17:35554985-35559052 (-)
CBA/J MGP_CBAJ_G0023345
 protein coding gene Chr17:38690053-38694117 (-)
DBA/2J MGP_DBA2J_G0023469
 protein coding gene Chr17:33898196-33902261 (-)
FVB/NJ MGP_FVBNJ_G0023440
 protein coding gene Chr17:33688261-33692335 (-)
LP/J MGP_LPJ_G0023549
 protein coding gene Chr17:36067458-36071552 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0023461
 protein coding gene Chr17:37497246-37502161 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0024086
 protein coding gene Chr17:35323750-35327842 (-)
PWK/PhJ MGP_PWKPhJ_G0022609
 protein coding gene Chr17:32750270-32754362 (-)
SPRET/EiJ MGP_SPRETEiJ_G0022428
 protein coding gene Chr17:33360483-33364520 (-)
WSB/EiJ MGP_WSBEiJ_G0022924
 protein coding gene Chr17:35454880-35458944 (-)



Homology
more
  • Human Ortholog
    TCF19, transcription factor 19
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TCF19, transcription factor 19
  • Synonyms
    SC1, TCF-19
  • Links
    NCBI Gene ID: 6941
    neXtProt AC: NX_Q9Y242
    UniProt: Q9Y242

  • Chr Location
    6p21.33; chr6:31158331-31167159 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    11 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    6
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    795
  • Tissues
    77
  • cDNA Data
    14
  • Literature Summary
    10
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000050410 Ensembl Gene Model | MGI Sequence Detail 4091 C57BL/6J ±  kb
transcript ENSMUST00000161012 Ensembl | MGI Sequence Detail 1665 Not Applicable  
polypeptide ENSMUSP00000125310 Ensembl | MGI Sequence Detail 263 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 15
    cDNA 14
    Primer pair 1

    Microarray probesets 4
Other
Accession IDs
less
MGD-MRK-24048, MGI:1913880, MGI:2147068
References
more
  • Summaries
    All 42
    Developmental Gene Expression 10
    Gene Ontology 2
    Phenotypes 11
  • Earliest
    J:51318 Ku DH, et al., A new growth-regulated complementary DNA with the sequence of a putative trans-activating factor. Cell Growth Differ. 1991 Apr;2(4):179-86
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory