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Eif3s6-ps2 Pseudogene Detail
Summary
  • Symbol
    Eif3s6-ps2
  • Name
    eukaryotic translation initiation factor 3, subunit 6, pseudogene 2
  • Synonyms
    Int6-ps2
  • Feature Type
    pseudogene
  • IDs
    MGI:103204
    NCBI Gene: 16343
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr18:90328992-90330314 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 18, 59.24 cM
  • Mapping Data
    6 experiments
Strain
Comparison
more
  • SNPs within 2kb
    113 from dbSNP Build 142
  • Strain Annotations
    17
  • RFLP
    2
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_103204
 pseudogene Chr18:90328867-90330325 (-)
129S1/SvImJ MGP_129S1SvImJ_G0011460
 pseudogene Chr18:91669474-91669692 (-)
A/J MGP_AJ_G0011463
 pseudogene Chr18:87585545-87585763 (-)
AKR/J MGP_AKRJ_G0011427
 pseudogene Chr18:90198340-90198558 (-)
BALB/cJ MGP_BALBcJ_G0011443
 pseudogene Chr18:87883678-87883896 (-)
C3H/HeJ MGP_C3HHeJ_G0011326
 pseudogene Chr18:90433468-90433686 (-)
C57BL/6NJ MGP_C57BL6NJ_G0011730
 pseudogene Chr18:94043687-94043905 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0011831
 pseudogene Chr6:14826838-14827089 (-)
CAST/EiJ MGP_CASTEiJ_G0011683
 pseudogene Chr3:16547099-16547341 (-)
CBA/J MGP_CBAJ_G0011300
 pseudogene Chr18:97404133-97404469 (-)
DBA/2J MGP_DBA2J_G0011355
 pseudogene Chr18:87186110-87186328 (-)
FVB/NJ MGP_FVBNJ_G0011360
 pseudogene Chr18:86455253-86455471 (-)
LP/J MGP_LPJ_G0011424
 pseudogene Chr18:91597656-91597874 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0011355
 pseudogene Chr18:99431689-99431907 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0011715
 pseudogene Chr18:90542132-90542350 (-)
PWK/PhJ MGP_PWKPhJ_G0010871
 pseudogene Chr17:12655879-12656095 (+)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0011159
 pseudogene Chr18:90423662-90423880 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    22
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000091697 Ensembl Gene Model | MGI Sequence Detail 1323 C57BL/6J ±  kb
transcript ENSMUST00000163304 Ensembl | MGI Sequence Detail 1323 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    Genomic 1
    cDNA 1
Other
Accession IDs
less
MGD-MRK-24072
References
more
  • Summaries
    All 9
    Phenotypes 2
  • Earliest
    J:27401 Miyazaki S, et al., The chromosomal location of the mouse mammary tumor gene Int6 and related pseudogenes in the mouse genome. Genomics. 1995 Jun 10;27(3):420-4
  • Latest
    J:132045 Chatterjee B, et al., Nt mutation causing laterality defects associated with deletion of rotatin. Mamm Genome. 2007 May;18(5):310-5
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory