Plk-ps1 Pseudogene Detail

Summary

• Symbol
  Plk-ps1
• Name
  polo like kinase, pseudogene 1

• Feature Type
  pseudogene
• IDs
  MGI:103247
  NCBI Gene: 18818
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:35711528-35713314 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 18.25 cM
• Mapping Data
  6 experiments

Strain
Comparison

• SNPs within 2kb
  179 from dbSNP Build 142
• Strain Annotations
  18
• RFLP
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_103247	pseudogene	Chr5:35711479-35713596 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0013056	pseudogene	Chr5:33841007-33842793 (+)
A/J	MGP_AJ_G0013040	pseudogene	Chr5:32735158-32736944 (+)
AKR/J	MGP_AKRJ_G0013007	pseudogene	Chr5:33992010-33993796 (+)
BALB/cJ	MGP_BALBcJ_G0013020	pseudogene	Chr5:33254606-33256392 (+)
C3H/HeJ	MGP_C3HHeJ_G0012871	pseudogene	Chr5:34009650-34011436 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0013379	pseudogene	Chr5:35750654-35755021 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012255	pseudogene	Chr7:124286027-124296023 (+)
CAST/EiJ	MGP_CASTEiJ_G0012603	pseudogene	Chr5:33104130-33105891 (+)
CBA/J	MGP_CBAJ_G0012838	pseudogene	Chr5:36592478-36594264 (+)
DBA/2J	MGP_DBA2J_G0012916	pseudogene	Chr5:32885564-32887350 (+)
FVB/NJ	MGP_FVBNJ_G0012922	pseudogene	Chr5:32345068-32346854 (+)
LP/J	MGP_LPJ_G0012989	pseudogene	Chr5:34276165-34277951 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012940	pseudogene	Chr5:37396206-37397992 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013381	pseudogene	Chr5:33495704-33497490 (+)
PWK/PhJ	MGP_PWKPhJ_G0012422	pseudogene	Chr5:32046923-32049022 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0012223	pseudogene	Chr5:32957029-32959056 (+)
WSB/EiJ	MGP_WSBEiJ_G0012640	pseudogene	Chr5:33557623-33559409 (+)

Homology

• Gene Tree
  Plk-ps1
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  9 phenotype references
  

• All Mutations and Alleles
  7
• Chemically induced (ENU)
  1
• Chemically induced (other)
  2
• Radiation induced
  3
• Spontaneous
  1
• Genomic Mutations
  7 involving Plk-ps1
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000083907 (Evidence)
• NCBI Gene
  18818

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083907	Ensembl Gene Model | MGI Sequence Detail	1787	C57BL/6J
transcript	ENSMUST00000119494	Ensembl | MGI Sequence Detail	1787	Not Applicable

Molecular
Reagents

• All nucleic 4

  Genomic 4

  
  

  Microarray probesets 2

Other
Accession IDs

MGD-MRK-24123

References

• Summaries
  All 18

  Diseases 1

  Phenotypes 9
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:100332 Wilson L, et al., Random mutagenesis of proximal mouse chromosome 5 uncovers predominantly embryonic lethal mutations. Genome Res. 2005 Aug;15(8):1095-105