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Calm3 Gene Detail
Summary
  • Symbol
    Calm3
  • Name
    calmodulin 3
  • Feature Type
    protein coding gene
  • IDs
    MGI:103249
    NCBI Gene: 12315
  • Alliance
    genome feature page
  • Transcription Start Sites
    18 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:16649304-16657957 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 9.15 cM
  • Mapping Data
    4 experiments
Strain
Comparison
more
  • SNPs within 2kb
    247 from dbSNP Build 142
  • Strain Annotations
    15
  • RFLP
    1
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_103249
 protein coding gene Chr7:16649304-16658039 (-)
129S1/SvImJ ENSMUSG00200041646
 protein coding gene Chr7:10027123-10028924 (-)
A/J ENSMUSG00195051137
 protein coding gene Chr7:10491784-10493588 (-)
AKR/J ENSMUSG00220024220
 protein coding gene Chr7:8784519-8786322 (-)
BALB/cJ ENSMUSG00180047594
 protein coding gene Chr7:10407576-10409380 (-)
C3H/HeJ ENSMUSG00175046957
 protein coding gene Chr7:10891902-10893702 (-)
C57BL/6NJ ENSMUSG00215054002
 protein coding gene Chr7:10148083-10149884 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0029247
 protein coding gene Chr7:15933344-15942000 (-)
CAST/EiJ no annotation
CBA/J ENSMUSG00210051239
 protein coding gene Chr7:10118925-10120726 (-)
DBA/2J ENSMUSG00185049964
 protein coding gene Chr7:13633712-13635518 (-)
FVB/NJ ENSMUSG00205050636
 protein coding gene Chr7:10518154-10519980 (-)
JF1/MsJ no annotation
LP/J ENSMUSG00230045743
 protein coding gene Chr7:17851490-17853290 (-)
NOD/ShiLtJ ENSMUSG00190028310
 protein coding gene Chr7:6953268-6955095 (-)
NOD/ShiLtJ ENSMUSG00190030882
 protein coding gene ChrX:136392147-136393448 (-)
NZO/HlLtJ ENSMUSG00225051277
 protein coding gene Chr7:15087958-15089761 (-)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    CALM3, calmodulin 3
  • Vertebrate Orthologs
    11
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CALM3, calmodulin 3
  • Synonyms
    CALM, CaM, CAM1, CAM2, CAMB, CaMIII, CPVT6, HEL-S-72, LQT16, PHKD, PHKD3
  • Links
    NCBI Gene ID: 808
    UniProt: P0DP25

  • Chr Location
    19q13.32; chr19:46601074-46610787 (+)  GRCh38
Human Diseases
more
  • Diseases
    2 with human CALM3 associations

Human Disease Mouse Models
      
IDs
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    249
  • GO References
    12
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    712
  • Tissues
    99
  • cDNA Data
    291
  • Literature Summary
    8
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 12315 NCBI Gene Model | MGI Sequence Detail 8654 C57BL/6J ±  kb
transcript NM_007590 RefSeq | MGI Sequence Detail 2233 ZRU/MplStud  
polypeptide P0DP28 UniProt | EBI | MGI Sequence Detail 149 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
  • GlyGen
    P0DP28 1 site, 1 O-linked glycan (1 site)
Molecular
Reagents
less
  • All nucleic 296
    Genomic 1
    cDNA 292
    Primer pair 2
    Other 1
    Antibodies 1

    Microarray probesets 4
Other
Accession IDs
less
MGD-MRK-24125, MGI:2142387
References
more
  • Summaries
    All 57
    Developmental Gene Expression 8
    Gene Ontology 12
    Phenotypes 9
  • Earliest
    J:19936 Bender PK, et al., The abundance of calmodulin mRNAs is regulated in phosphorylase kinase-deficient skeletal muscle. J Biol Chem. 1988 Jul 15;263(20):9733-7
  • Latest
    J:389866 Kim JA, et al., HAP1 interaction with KCNQ4 attenuates channel surface expression and function. Mol Cells. 2026 Mar;49(3):100322
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/01/2026
MGI 6.24 		The Jackson Laboratory