Phxr1 Gene Detail

Summary

• Symbol
  Phxr1
• Name
  per-hexamer repeat gene 1
• Synonyms
  SP34

• Feature Type
  protein coding gene
• IDs
  MGI:104525
  NCBI Gene: 18686
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:3432902-3433422 bp, + strand

  From MGI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, cytoband A1
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  96 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_104525	protein coding gene	Chr2:3432902-3433422 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Gene Ontology
(GO)
Classifications

Expression

• cDNA Data
  4

• Other Mouse Links
  Allen Institute
  GEO

Sequences &
Gene Models

• All Sequences
  6
• UniProt
  2

• NCBI Gene
  18686

Representative Sequences			Length	Strain/Species
transcript	X12809	GenBank | ENA | DDBJ | MGI Sequence Detail	522	BALB/c
polypeptide	P15973	UniProt | EBI | MGI Sequence Detail	60	Not Applicable

Protein
Information

• UniProt
  2 Sequences
• Protein Ontology
  PR:000033322 putative per-hexamer repeat protein 1
  (term hierarchy)

Molecular
Reagents

• All nucleic 4

  cDNA 4

  
  

  Microarray probesets 2

Other
Accession IDs

MGD-MRK-25956

References

• Summaries
  All 11
• Earliest
  J:20253 Nishimatsu S, et al., Mouse spleen derived cDNA clones containing per repeat sequence. Nucleic Acids Res. 1988 Dec 23;16(24):11831-2