Rnu1b6 Gene Detail

Summary

• Symbol
  Rnu1b6
• Name
  U1b6 small nuclear RNA
• Synonyms
  U1b6

• Feature Type
  snRNA gene
• IDs
  MGI:104604
  NCBI Gene: 19847
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:96367340-96367505 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 41.86 cM

Strain
Comparison

• SNPs within 2kb
  1 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_104604	snRNA gene	Chr3:96367340-96367505 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Rnu1b6
  

Gene Ontology
(GO)
Classifications

Expression

• Other Mouse Links
  GEO

Sequences &
Gene Models

• All Sequences
  6
• RefSeq
  1

• Ensembl
  ENSMUSG00000118677 (Evidence)
• NCBI Gene
  19847

Representative Sequences			Length	Strain/Species
genomic	19847	NCBI Gene Model | MGI Sequence Detail	166	C57BL/6J
transcript	NR_004413	RefSeq | MGI Sequence Detail	166	ZRU/MplStud

Molecular
Reagents

• All nucleic 4

  Genomic 4

Other
Accession IDs

MGD-MRK-26040

References

• Summaries
  All 7
• Earliest
  J:8312 Michael SK, et al., Characterization and mapping of DNA sequence homologous to mouse U1a1 snRNA: localization on chromosome 11 near the Dlb-1 and Re loci. Somat Cell Mol Genet. 1986 May;12(3):215-23
• Latest
  J:8579 Howard EF, et al., Functional, developmentally expressed genes for mouse U1a and U1b snRNAs contain both conserved and non-conserved transcription signals. Nucleic Acids Res. 1986 Dec 22;14(24):9811-25