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Hmgb1-rs16 Pseudogene Detail
Summary
  • Symbol
    Hmgb1-rs16
  • Name
    high mobility group box 1, related sequence 16
  • Synonyms
    Hmg1-rs16
  • Feature Type
    pseudogene
  • IDs
    MGI:104765
    NCBI Gene: 15296
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr9:104046617-104047073 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 56.61 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    115 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_104765
 pseudogene Chr9:104046398-104047073 (-)
129S1/SvImJ MGP_129S1SvImJ_G0014246
 pseudogene Chr9:105825235-105825847 (-)
A/J MGP_AJ_G0014262
 pseudogene Chr9:102022025-102022637 (-)
AKR/J MGP_AKRJ_G0014187
 pseudogene Chr9:104556443-104557055 (-)
BALB/cJ MGP_BALBcJ_G0014212
 pseudogene Chr9:101735890-101736502 (-)
C3H/HeJ MGP_C3HHeJ_G0014043
 pseudogene Chr9:104935813-104936425 (-)
C57BL/6NJ MGP_C57BL6NJ_G0014665
 pseudogene Chr9:108756614-108757226 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0012475
 pseudogene Chr9:99589242-99589867 (-)
CAST/EiJ MGP_CASTEiJ_G0013697
 pseudogene Chr9:104817525-104818133 (-)
CBA/J MGP_CBAJ_G0014024
 pseudogene Chr9:112546737-112547360 (-)
DBA/2J MGP_DBA2J_G0014109
 pseudogene Chr9:101505079-101505691 (-)
FVB/NJ MGP_FVBNJ_G0014108
 pseudogene Chr9:100310734-100311346 (-)
LP/J MGP_LPJ_G0014200
 pseudogene Chr9:106036251-106036863 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0014143
 pseudogene Chr9:114307731-114308343 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0014636
 pseudogene Chr9:104792872-104793484 (-)
PWK/PhJ MGP_PWKPhJ_G0013511
 pseudogene Chr9:101792665-101793354 (-)
SPRET/EiJ MGP_SPRETEiJ_G0013301
 pseudogene Chr9:104869375-104870034 (-)
WSB/EiJ MGP_WSBEiJ_G0013758
 pseudogene Chr9:104678846-104679469 (-)



Homology
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Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 15296 NCBI Gene Model | MGI Sequence Detail 457 C57BL/6J ±  kb
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    Genomic 1
Other
Accession IDs
less
MGD-MRK-28056
References
more
  • Summaries
    All 6
  • Earliest
    J:21498 Ferrari S, et al., The mouse gene coding for high mobility group 1 protein (HMG1). J Biol Chem. 1994 Nov 18;269(46):28803-8
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory