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Tdgf1-ps1 Pseudogene Detail
Summary
  • Symbol
    Tdgf1-ps1
  • Name
    teratocarcinoma-derived growth factor, pseudogene 1
  • Synonyms
    Gm6148, Tdgf2
  • Feature Type
    pseudogene
  • IDs
    MGI:107367
    NCBI Gene: 620395
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr16:3548374-3548886 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 16, 2.19 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    15 from dbSNP Build 142
  • Strain Annotations
    8
  • PCR
    1
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_107367
 pseudogene Chr16:3548122-3549019 (+)
129S1/SvImJ no annotation
A/J no annotation
AKR/J no annotation
BALB/cJ MGP_BALBcJ_G0011178
 pseudogene Chr16:169637-170161 (+)
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0011473
 pseudogene Chr16:220607-221122 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0010411
 pseudogene Chr2:36033360-36033843 (+)
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0011056
 pseudogene Chr16:262491-264967 (+)
DBA/2J no annotation
FVB/NJ no annotation
LP/J no annotation
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0011451
 pseudogene Chr16:157367-157882 (+)
PWK/PhJ MGP_PWKPhJ_G0011129
 pseudogene Chr2:37143997-37144493 (+)
SPRET/EiJ MGP_SPRETEiJ_G0010949
 pseudogene Chr2:38656553-38657042 (+)
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    13
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000095834 Ensembl Gene Model | MGI Sequence Detail 513 C57BL/6J ±  kb
transcript ENSMUST00000179882 Ensembl | MGI Sequence Detail 513 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    Genomic 1
    cDNA 1
    Primer pair 1
Other
Accession IDs
less
MGD-MRK-35834, MGI:3645496
References
more
  • Summaries
    All 12
    Phenotypes 3
  • Earliest
    J:33161 Liguori G, et al., Characterization of the mouse Tdgf1 gene and Tdgf pseudogenes. Mamm Genome. 1996 May;7(5):344-8
  • Latest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
06/12/2024
MGI 6.13 		The Jackson Laboratory