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Dbx2 Gene Detail
Summary
  • Symbol
    Dbx2
  • Name
    developing brain homeobox 2
  • Synonyms
    9430056A22Rik, LOC383001
  • Feature Type
    protein coding gene
  • IDs
    MGI:107445
    NCBI Gene: 223843
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr15:95521444-95552838 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 15, 50.47 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1043 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_107445
 protein coding gene Chr15:95521444-95553841 (-)
129S1/SvImJ MGP_129S1SvImJ_G0022264
 protein coding gene Chr15:97142171-97176940 (-)
A/J MGP_AJ_G0022223
 protein coding gene Chr15:93361326-93394322 (-)
AKR/J MGP_AKRJ_G0022198
 protein coding gene Chr15:96165035-96197921 (-)
BALB/cJ MGP_BALBcJ_G0022229
 protein coding gene Chr15:93533264-93566790 (-)
C3H/HeJ MGP_C3HHeJ_G0021999
 protein coding gene Chr15:96205606-96239713 (-)
C57BL/6NJ MGP_C57BL6NJ_G0022674
 protein coding gene Chr15:100744943-100778944 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0020200
 protein coding gene Chr15:89368847-89401857 (-)
CAST/EiJ MGP_CASTEiJ_G0021521
 protein coding gene Chr15:97057762-97093422 (-)
CBA/J MGP_CBAJ_G0021966
 protein coding gene Chr15:104097809-104133643 (-)
DBA/2J MGP_DBA2J_G0022093
 protein coding gene Chr15:92806758-92839365 (-)
FVB/NJ MGP_FVBNJ_G0022072
 protein coding gene Chr15:91796571-91828906 (-)
LP/J MGP_LPJ_G0022164
 protein coding gene Chr15:97276740-97311327 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0022092
 protein coding gene Chr15:108369059-108403748 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0022689
 protein coding gene Chr15:96271825-96307208 (-)
PWK/PhJ MGP_PWKPhJ_G0021262
 protein coding gene Chr15:92869540-92903454 (-)
SPRET/EiJ MGP_SPRETEiJ_G0021096
 protein coding gene Chr15:96054575-96089719 (-)
WSB/EiJ MGP_WSBEiJ_G0021570
 protein coding gene Chr15:96781098-96813998 (-)



Homology
more
  • Human Ortholog
    DBX2, developing brain homeobox 2
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    DBX2, developing brain homeobox 2
  • Links
    NCBI Gene ID: 440097
    neXtProt AC: NX_Q6ZNG2
    UniProt: Q6ZNG2

  • Chr Location
    12q12; chr12:45014672-45051099 (-)  GRCh38
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotypes from 2 alleles in 2 genetic backgrounds
    27 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice homozygous or heterozygous for a null allele exhibit partial preweaning lethality, but normal skeleton phenotype.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    5
  • GO References
    2
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    939
  • Tissues
    170
  • cDNA Data
    8
  • Literature Summary
    37
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 223843 NCBI Gene Model | MGI Sequence Detail 31395 C57BL/6J ±  kb
    transcript NM_207533 RefSeq | MGI Sequence Detail 2271 ZRU/MplStud  
    polypeptide NP_997416 RefSeq | MGI Sequence Detail 377 ZRU/MplStud  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 15
      Genomic 1
      cDNA 8
      Primer pair 3
      Other 3

      Microarray probesets 1
    Other
    Accession IDs
    less
    MGD-MRK-35916, MGI:2146074, MGI:2686075
    References
    more
    • Summaries
      All 77
      Developmental Gene Expression 37
      Diseases 1
      Gene Ontology 2
      Phenotypes 27
    • Earliest
      J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/12/2024
    MGI 6.24     		The Jackson Laboratory