Or7a40 MGI Mouse Gene Detail - MGI:109316 - olfactory receptor family 7 subfamily A member 40

Symbol

Or7a40
Name

olfactory receptor family 7 subfamily A member 40
Synonyms

GA_x54KRFPKG5P-13123979-13123050, M12, MOR140-1, MTPCR15, Olfr19

Feature Type

protein coding gene
IDs

MGI:109316
NCBI Gene: 18316
Alliance

gene page

Sequence Map

Chr16:16490914-16491843 bp, - strand
From NCBI annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

Genetic Map

Chromosome 16, 10.34 cM, cytoband B1
Mapping Data

2 experiments

SNPs within 2kb

101 from dbSNP Build 142
Strain Annotations

18

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_109316	protein coding gene	Chr16:16490092-16494269 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0022559	protein coding gene	Chr16:13771431-13774960 (-)
A/J	MGP_AJ_G0022520	protein coding gene	Chr16:13081158-13084687 (-)
AKR/J	MGP_AKRJ_G0022497	protein coding gene	Chr16:13623186-13626715 (-)
BALB/cJ	MGP_BALBcJ_G0022525	protein coding gene	Chr16:13237490-13241019 (-)
C3H/HeJ	MGP_C3HHeJ_G0022292	protein coding gene	Chr16:13707358-13710887 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0022974	protein coding gene	Chr16:13959742-13963271 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0020494	protein coding gene	Chr16:13143933-13147466 (-)
CAST/EiJ	MGP_CASTEiJ_G0021819	protein coding gene	Chr16:13630601-13634117 (-)
CBA/J	MGP_CBAJ_G0022261	protein coding gene	Chr16:14608526-14612055 (-)
DBA/2J	MGP_DBA2J_G0022393	protein coding gene	Chr16:13025836-13029365 (-)
FVB/NJ	MGP_FVBNJ_G0022368	protein coding gene	Chr16:13051636-13055165 (-)
LP/J	MGP_LPJ_G0022460	protein coding gene	Chr16:13564518-13568047 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0022390	protein coding gene	Chr16:14316782-14320311 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0022987	protein coding gene	Chr16:13523993-13527522 (-)
PWK/PhJ	MGP_PWKPhJ_G0021561	protein coding gene	Chr16:13248262-13252517 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0021389	protein coding gene	Chr16:13535387-13538904 (-)
WSB/EiJ	MGP_WSBEiJ_G0021867	protein coding gene	Chr16:13541408-13544937 (-)

Human Ortholog

OR7A10, olfactory receptor family 7 subfamily A member 10

Vertebrate Orthologs

5

Vertebrate Orthology Source

Alliance of Genome Resources

Human Ortholog

OR7A10, olfactory receptor family 7 subfamily A member 10
Synonyms

BC85395_3, OR19-18
Links

HGNC:8356

NCBI Gene ID: 390892

neXtProt AC: NX_O76100

UniProt: O76100
Chr Location

19p13.12

Human Ortholog

OR7A17, olfactory receptor family 7 subfamily A member 17
Synonyms

BC85395_4, HTPCRX19
Links

HGNC:8363

NCBI Gene ID: 26333

neXtProt AC: NX_O14581

UniProt: O14581
Chr Location

19p13.12; chr19:14878203-14886132 (-) GRCh38

Human Ortholog

OR7A2P, olfactory receptor family 7 subfamily A member 2 pseudogene
Synonyms

hg1003, OLF4p, OR19-18, OR7A2, OR7A7
Links

HGNC:8370

NCBI Gene ID: 390894

UniProt: Q8NGA2
Chr Location

19p13.12; chr19:14863586-14865262 (-) GRCh38

Human Ortholog

OR7A5, olfactory receptor family 7 subfamily A member 5
Synonyms

HTPCR2
Links

HGNC:8368

NCBI Gene ID: 26659

neXtProt AC: NX_Q15622

UniProt: Q15622
Chr Location

19p13.12; chr19:14826241-14835185 (-) GRCh38

MGI Vertebrate Homology

Or7a40 stringent orthology
4 human;1 mouse;1 rat
HCOP

vertebrate homology predictions: OR7A10, OR7A17, OR7A2P, OR7A5
Gene Tree

Or7a40

less

Incidental Mutations

APF
Find Mice (IMSR)

15 strains or lines available

less

All GO Annotations

9
GO References

4

Molecular Function

carbohydrate derivative binding	cytoskeletal protein binding	DNA binding	enzyme regulator	hydrolase	ligase	lipid binding	oxidoreductase	RNA binding	signaling receptor activity	signaling receptor binding	transcription	transferase	transporter

Biological Process

carbohydrate derivative metabolism	cell differentiation	cell population proliferation	cellular component organization	DNA-templated transcription	establishment of localization	homeostatic process	immune system process	lipid metabolic process	programmed cell death	protein metabolic process	response to stimulus	signaling	system development

Cellular Component

cell projection	cytoplasmic vesicle	cytoskeleton	cytosol	endoplasmic reticulum	endosome	extracellular region	Golgi apparatus	mitochondrion	membraneless organelle	nucleus	organelle envelope	organelle lumen	plasma membrane	protein-containing complex	synapse	vacuole

Click cells to view annotations.

less

Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

Assay Results

732
Tissues

15
cDNA Data

4
Literature Summary

2

Images

Tissue x Stage Matrix

Other Mouse Links

Allen Institute

GEO

Expression Atlas

less

All Sequences

33
RefSeq

2
UniProt

3
CCDS

CCDS27987.1

Ensembl

ENSMUSG00000048101 (Evidence)
NCBI Gene

18316

			Length	Strain/Species	Flank
genomic	18316	NCBI Gene Model \| MGI Sequence Detail	930	C57BL/6J	± kb
transcript	NM_146335	RefSeq \| MGI Sequence Detail	930	Not Specified
polypeptide	Q9JHB2	UniProt \| EBI \| MGI Sequence Detail	309	Not Applicable

less

UniProt

3 Sequences
Protein Ontology

PR:000012142 olfactory receptor 7A40

(term hierarchy)
InterPro Domains

IPR017452 GPCR, rhodopsin-like, 7TM

IPR000276 G protein-coupled receptor, rhodopsin-like

IPR000725 Olfactory receptor
GlyGen

Q9JHB2 1 site

less

All nucleic 6

cDNA 4

Primer pair 1

Other 1

Microarray probesets 1

less

MGD-MRK-38361, MGI:7276842

Summaries

All 24

Developmental Gene Expression 2

Gene Ontology 4
Earliest

J:36595 Mombaerts P, et al., Visualizing an olfactory sensory map. Cell. 1996 Nov 15;87(4):675-86
Latest

J:289678 Olender T, et al., A unified nomenclature for vertebrate olfactory receptors. BMC Evol Biol. 2020 Apr 15;20(1):42

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 11/12/2024 MGI 6.24