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Snrp1c-ps1 Pseudogene Detail
Summary
  • Symbol
    Snrp1c-ps1
  • Name
    U1 small nuclear ribonucleoprotein 1C, pseudogene 1
  • Synonyms
    mC-[y]15
  • Feature Type
    pseudogene
  • IDs
    MGI:109488
    NCBI Gene: 20631
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr7:126323108-126323478 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 69.25 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    102 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_109488
 pseudogene Chr7:126323108-126323581 (+)
129S1/SvImJ MGP_129S1SvImJ_G0014008
 pseudogene Chr7:131015645-131016118 (+)
A/J MGP_AJ_G0014027
 pseudogene Chr7:127547821-127548294 (+)
AKR/J MGP_AKRJ_G0013961
 pseudogene Chr7:130779872-130780345 (+)
BALB/cJ MGP_BALBcJ_G0013984
 pseudogene Chr7:127204739-127205212 (+)
C3H/HeJ MGP_C3HHeJ_G0013819
 pseudogene Chr7:130716145-130716618 (+)
C57BL/6NJ MGP_C57BL6NJ_G0014416
 pseudogene Chr7:136113238-136113711 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0012272
 pseudogene Chr7:128742024-128742497 (+)
CAST/EiJ MGP_CASTEiJ_G0013474
 pseudogene Chr7:122494349-122494822 (+)
CBA/J MGP_CBAJ_G0013799
 pseudogene Chr7:140694752-140695225 (+)
DBA/2J MGP_DBA2J_G0013876
 pseudogene Chr7:125523382-125523855 (+)
FVB/NJ MGP_FVBNJ_G0013877
 pseudogene Chr7:125370373-125370846 (+)
LP/J MGP_LPJ_G0013955
 pseudogene Chr7:132480866-132481339 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0013903
 pseudogene Chr7:141875296-141875769 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0014382
 pseudogene Chr7:129787635-129788108 (+)
PWK/PhJ MGP_PWKPhJ_G0013289
 pseudogene Chr7:118515488-118515961 (+)
SPRET/EiJ MGP_SPRETEiJ_G0013059
 pseudogene Chr7:116633521-116633994 (+)
WSB/EiJ MGP_WSBEiJ_G0013536
 pseudogene Chr7:130768738-130769211 (+)



Homology
less
Human Diseases
less
  • References
    2 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    36 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 20631 NCBI Gene Model | MGI Sequence Detail 371 C57BL/6J ±  kb
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    Genomic 2
Other
Accession IDs
less
MGD-MRK-39487
References
more
  • Summaries
    All 42
    Diseases 2
    Phenotypes 36
  • Earliest
    J:37896 Nelissen RL, et al., Cloning and characterization of two processed pseudogenes and the cDNA for the murine U1 snRNP-specific protein C. Gene. 1997 Jan 15;184(2):273-8
  • Latest
    J:349484 Henis M, et al., The autism susceptibility kinase, TAOK2, phosphorylates eEF2 and modulates translation. Sci Adv. 2024 Apr 12;10(15):eadf7001
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory