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Odf2l Gene Detail
Summary
  • Symbol
    Odf2l
  • Name
    outer dense fiber of sperm tails 2-like
  • Synonyms
    4733401D09Rik, 9630045K08Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1098600
    NCBI Gene: 52184
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:144824349-144859676 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 69.36 cM, cytoband H3
  • Mapping Data
    4 experiments
Strain
Comparison
more
  • SNPs within 2kb
    976 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1098600
 protein coding gene Chr3:144824330-144859676 (+)
129S1/SvImJ MGP_129S1SvImJ_G0027958
 protein coding gene Chr3:148503821-148543804 (+)
A/J MGP_AJ_G0027917
 protein coding gene Chr3:143224273-143259050 (+)
AKR/J MGP_AKRJ_G0027883
 protein coding gene Chr3:147019540-147054938 (+)
BALB/cJ MGP_BALBcJ_G0027929
 protein coding gene Chr3:143036479-143072966 (+)
C3H/HeJ MGP_C3HHeJ_G0027659
 protein coding gene Chr3:147387447-147426653 (+)
C57BL/6NJ MGP_C57BL6NJ_G0028372
 protein coding gene Chr3:153615844-153656617 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0025711
 protein coding gene Chr3:138319015-138354316 (+)
CAST/EiJ MGP_CASTEiJ_G0027112
 protein coding gene Chr3:147341328-147380678 (+)
CBA/J MGP_CBAJ_G0027634
 protein coding gene Chr3:158941362-158984573 (+)
DBA/2J MGP_DBA2J_G0027774
 protein coding gene Chr3:142378973-142415360 (+)
FVB/NJ MGP_FVBNJ_G0027741
 protein coding gene Chr3:139786357-139824056 (+)
LP/J MGP_LPJ_G0027885
 protein coding gene Chr3:149903676-149940486 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0027774
 protein coding gene Chr3:167276123-167316024 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0028431
 protein coding gene Chr3:146617577-146656055 (+)
PWK/PhJ MGP_PWKPhJ_G0026835
 protein coding gene Chr3:142222572-142259484 (+)
SPRET/EiJ MGP_SPRETEiJ_G0026663
 protein coding gene Chr3:144789215-144825201 (+)
WSB/EiJ MGP_WSBEiJ_G0027192
 protein coding gene Chr3:147575578-147613882 (+)



Homology
more
  • Human Ortholog
    ODF2L, outer dense fiber of sperm tails 2 like
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ODF2L, outer dense fiber of sperm tails 2 like
  • Links
    NCBI Gene ID: 57489
    neXtProt AC: NX_Q9ULJ1
    UniProt: Q9ULJ1

  • Chr Location
    1p22.3; chr1:86346824-86396342 (-)  GRCh38
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotypes from 1 allele in 1 genetic background
    7 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    14
  • GO References
    6
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    707
  • Tissues
    1
  • cDNA Data
    12
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000028256 Ensembl Gene Model | MGI Sequence Detail 35328 C57BL/6J ±  kb
transcript ENSMUST00000098538 Ensembl | MGI Sequence Detail 2564 Not Applicable  
polypeptide ENSMUSP00000096140 Ensembl | MGI Sequence Detail 642 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 14
    cDNA 13
    Primer pair 1

    Microarray probesets 4
Other
Accession IDs
less
MGI:1913949, MGI:2445219
References
more
  • Summaries
    All 37
    Developmental Gene Expression 1
    Diseases 1
    Gene Ontology 6
    Phenotypes 7
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory