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Psmb5-ps Pseudogene Detail
Summary
  • Symbol
    Psmb5-ps
  • Name
    proteasome (prosome, macropain) subunit, beta type 5, pseudogene
  • Feature Type
    pseudogene
  • IDs
    MGI:1194501
    NCBI Gene: 19174
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr11:102549954-102550751 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 66.48 cM, cytoband D
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    115 from dbSNP Build 142
  • Strain Annotations
    4
  • PCR
    1
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1194501
 pseudogene Chr11:102549881-102550755 (-)
129S1/SvImJ no annotation
A/J MGP_AJ_G0010846
 pseudogene Chr11:101193539-101194344 (-)
AKR/J MGP_AKRJ_G0010806
 pseudogene Chr11:104330505-104331204 (-)
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0011094
 pseudogene Chr11:108950121-108950918 (-)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J no annotation
FVB/NJ no annotation
LP/J no annotation
NOD/ShiLtJ no annotation
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    9
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000080992 Ensembl Gene Model | MGI Sequence Detail 798 C57BL/6J ±  kb
transcript ENSMUST00000119744 Ensembl | MGI Sequence Detail 798 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    Genomic 2
    Primer pair 1

    Microarray probesets 1
References
more
  • Summaries
    All 6
  • Earliest
    J:44713 Kohda K, et al., Structural analysis and chromosomal localization of the mouse Psmb5 gene coding for the constitutively expressed beta-type proteasome subunit. Immunogenetics. 1997;47(1):77-87
  • Latest
    J:65084 Pershouse M, et al., BAC contig from a 3-cM region of mouse chromosome 11 surrounding brca1. Genomics. 2000 Oct 1;69(1):139-42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory