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D6Ertd474e Gene Detail
Summary
  • Symbol
    D6Ertd474e
  • Name
    DNA segment, Chr 6, ERATO Doi 474, expressed
  • Synonyms
    1700001I24Rik
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1196315
    NCBI Gene: 52285
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:143191614-143242998 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 75.50 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1963 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1196315
 lncRNA gene Chr6:143191614-143243605 (+)
129S1/SvImJ MGP_129S1SvImJ_G0007091
 lincRNA gene Chr6:148089898-148141141 (+)
A/J MGP_AJ_G0007088
 lincRNA gene Chr6:142270493-142326671 (+)
AKR/J MGP_AKRJ_G0007056
 lincRNA gene Chr6:146493618-146544922 (+)
BALB/cJ MGP_BALBcJ_G0007063
 lincRNA gene Chr6:142037176-142088379 (+)
C3H/HeJ MGP_C3HHeJ_G0007008
 lincRNA gene Chr6:146525600-146577241 (+)
C57BL/6NJ MGP_C57BL6NJ_G0007228
 lincRNA gene Chr6:152131187-152187796 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0006453
 lincRNA gene Chr6:141076554-141128491 (+)
CAST/EiJ MGP_CASTEiJ_G0006914
 lincRNA gene Chr6:146130341-146183462 (+)
CBA/J MGP_CBAJ_G0006988
 lincRNA gene Chr6:157926087-157983971 (+)
DBA/2J MGP_DBA2J_G0007010
 lincRNA gene Chr6:141091295-141142055 (+)
FVB/NJ MGP_FVBNJ_G0007033
 lincRNA gene Chr6:139837191-139886665 (+)
LP/J MGP_LPJ_G0007094
 lincRNA gene Chr6:148227266-148277788 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0007013
 lincRNA gene Chr6:161799935-161854830 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0007235
 lincRNA gene Chr6:146343167-146394946 (+)
PWK/PhJ MGP_PWKPhJ_G0006858
 lincRNA gene Chr6:139579247-139634401 (+)
SPRET/EiJ MGP_SPRETEiJ_G0006769
 lincRNA gene Chr6:144522731-144573464 (+)
WSB/EiJ MGP_WSBEiJ_G0006975
 lincRNA gene Chr6:146931659-146989762 (+)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    711
  • Tissues
    1
  • cDNA Data
    14
  • Literature Summary
    1
Sequences &
Gene Models
less
  • All Sequences
    39
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000072679 Ensembl Gene Model | MGI Sequence Detail 51385 C57BL/6J ±  kb
transcript ENSMUST00000100817 Ensembl | MGI Sequence Detail 2149 Not Applicable  
polypeptide Q3UT75 UniProt | EBI | MGI Sequence Detail 93 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 15
    cDNA 14
    Primer pair 1

    Microarray probesets 2
Other
Accession IDs
less
MGI:1923948, MGI:2141574
References
more
  • Summaries
    All 19
    Developmental Gene Expression 1
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory