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Tmem106c Gene Detail
Summary
  • Symbol
    Tmem106c
  • Name
    transmembrane protein 106C
  • Synonyms
    D15Ertd405e, MGC:54819
  • Feature Type
    protein coding gene
  • IDs
    MGI:1196384
    NCBI Gene: 380967
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr15:97862081-97868156 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 15, 53.96 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    322 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1196384
 protein coding gene Chr15:97862077-97868158 (+)
129S1/SvImJ MGP_129S1SvImJ_G0022282
 protein coding gene Chr15:99650603-99656544 (+)
A/J MGP_AJ_G0022241
 protein coding gene Chr15:95705950-95711806 (+)
AKR/J MGP_AKRJ_G0022216
 protein coding gene Chr15:98598316-98604142 (+)
BALB/cJ MGP_BALBcJ_G0022247
 protein coding gene Chr15:95931120-95937184 (+)
C3H/HeJ MGP_C3HHeJ_G0022017
 protein coding gene Chr15:98667992-98673853 (+)
C57BL/6NJ MGP_C57BL6NJ_G0022692
 protein coding gene Chr15:103335013-103340838 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0020218
 protein coding gene Chr15:91651830-91657632 (+)
CAST/EiJ MGP_CASTEiJ_G0021539
 protein coding gene Chr15:99545866-99553122 (+)
CBA/J MGP_CBAJ_G0021984
 protein coding gene Chr15:106790553-106796428 (+)
DBA/2J MGP_DBA2J_G0022111
 protein coding gene Chr15:95157907-95163773 (+)
FVB/NJ MGP_FVBNJ_G0022090
 protein coding gene Chr15:94144774-94152323 (+)
LP/J MGP_LPJ_G0022182
 protein coding gene Chr15:99762412-99769663 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0022110
 protein coding gene Chr15:110902908-110909745 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0022707
 protein coding gene Chr15:98750091-98755987 (+)
PWK/PhJ MGP_PWKPhJ_G0021280
 protein coding gene Chr15:95260810-95267070 (+)
SPRET/EiJ MGP_SPRETEiJ_G0021114
 protein coding gene Chr15:98525530-98531403 (+)
WSB/EiJ MGP_WSBEiJ_G0021588
 protein coding gene Chr15:99264063-99270009 (+)



Homology
more
  • Human Ortholog
    TMEM106C, transmembrane protein 106C
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TMEM106C, transmembrane protein 106C
  • Links
    NCBI Gene ID: 79022
    neXtProt AC: NX_Q9BVX2
    UniProt: Q9BVX2

  • Chr Location
    12q13.11; chr12:47963569-47968878 (+)  GRCh38
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    22 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    719
  • Tissues
    7
  • cDNA Data
    8
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000052369 Ensembl Gene Model | MGI Sequence Detail 6076 C57BL/6J ±  kb
transcript ENSMUST00000229428 Ensembl | MGI Sequence Detail 1455 Not Applicable  
polypeptide ENSMUSP00000154819 Ensembl | MGI Sequence Detail 260 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 10
    cDNA 9
    Primer pair 1

    Microarray probesets 3
Other
Accession IDs
less
MGI:2145941, MGI:2687015
References
more
  • Summaries
    All 44
    Developmental Gene Expression 1
    Diseases 1
    Gene Ontology 1
    Phenotypes 22
  • Earliest
    J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
  • Latest
    J:285676 Suzuki A, et al., Genes and microRNAs associated with mouse cleft palate: A systematic review and bioinformatics analysis. Mech Dev. 2018 Apr;150:21-27
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory