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Cbx7 Gene Detail
Summary
  • Symbol
    Cbx7
  • Name
    chromobox 7
  • Synonyms
    1600014J01Rik, D15Ertd417e
  • Feature Type
    protein coding gene
  • IDs
    MGI:1196439
    NCBI Gene: 52609
  • Alliance
    gene page
  • Transcription Start Sites
    8 TSS
Location &
Maps
more
  • Sequence Map
    Chr15:79800008-79855320 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 15, 37.85 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    972 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1196439
 protein coding gene Chr15:79800005-79855344 (-)
129S1/SvImJ MGP_129S1SvImJ_G0022090
 protein coding gene Chr15:80214712-80274491 (-)
A/J MGP_AJ_G0022051
 protein coding gene Chr15:77444649-77500098 (-)
AKR/J MGP_AKRJ_G0022026
 protein coding gene Chr15:79596804-79657882 (-)
BALB/cJ MGP_BALBcJ_G0022057
 protein coding gene Chr15:77448651-77507646 (-)
C3H/HeJ MGP_C3HHeJ_G0021828
 protein coding gene Chr15:79589366-79649325 (-)
C57BL/6NJ MGP_C57BL6NJ_G0022500
 protein coding gene Chr15:83372194-83432152 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0020030
 protein coding gene Chr15:73928444-73985016 (-)
CAST/EiJ MGP_CASTEiJ_G0021349
 protein coding gene Chr15:80317801-80376406 (-)
CBA/J MGP_CBAJ_G0021793
 protein coding gene Chr15:85982125-86049194 (-)
DBA/2J MGP_DBA2J_G0021922
 protein coding gene Chr15:76940567-76996274 (-)
FVB/NJ MGP_FVBNJ_G0021900
 protein coding gene Chr15:75958288-76018738 (-)
LP/J MGP_LPJ_G0021990
 protein coding gene Chr15:80398273-80453764 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0021920
 protein coding gene Chr15:91056447-91113437 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0022514
 protein coding gene Chr15:79640300-79699599 (-)
PWK/PhJ MGP_PWKPhJ_G0021090
 protein coding gene Chr15:76911057-76999129 (-)
SPRET/EiJ MGP_SPRETEiJ_G0020928
 protein coding gene Chr15:79440595-79503045 (-)
WSB/EiJ MGP_WSBEiJ_G0021401
 protein coding gene Chr15:80032476-80090372 (-)



Homology
more
  • Human Ortholog
    CBX7, chromobox 7
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CBX7, chromobox 7
  • Links
    NCBI Gene ID: 23492
    neXtProt AC: NX_O95931
    UniProt: O95931

  • Chr Location
    22q13.1; chr22:39120167-39152680 (-)  GRCh38
Human Diseases
more
  • Diseases
    3 with human CBX7 associations

Human Disease Mouse Models
      
IDs
IDs
IDs
Click on a disease name to see all genes associated with that disease.

  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    13 phenotypes from 2 alleles in 2 genetic backgrounds
    2 images
    42 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice homozygous for a knock-out allele exhibit increased body length and develop liver and lung adenomas and carcinomas while mutant embryonic fibriblasts show a higher growth rate and reduced susceptibility to senescence.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    18
  • GO References
    9
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    721
  • Tissues
    15
  • cDNA Data
    55
  • Literature Summary
    3
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000053411 Ensembl Gene Model | MGI Sequence Detail 55313 C57BL/6J ±  kb
    transcript ENSMUST00000089293 Ensembl | MGI Sequence Detail 3388 Not Applicable  
    polypeptide ENSMUSP00000086708 Ensembl | MGI Sequence Detail 251 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 57
      Genomic 1
      cDNA 55
      Primer pair 1

      Microarray probesets 5
    Other
    Accession IDs
    less
    MGI:1917043, MGI:2146090
    References
    more
    • Summaries
      All 87
      Developmental Gene Expression 3
      Diseases 1
      Gene Ontology 9
      Phenotypes 42
    • Earliest
      J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/12/2024
    MGI 6.24     		The Jackson Laboratory