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Ccdc97 Gene Detail
Summary
  • Symbol
    Ccdc97
  • Name
    coiled-coil domain containing 97
  • Synonyms
    1200014H14Rik, 2810446P04Rik, D7Ertd462e
  • Feature Type
    protein coding gene
  • IDs
    MGI:1196455
    NCBI Gene: 52132
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:25410537-25418460 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 13.99 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    213 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1196455
 protein coding gene Chr7:25410531-25418513 (-)
129S1/SvImJ MGP_129S1SvImJ_G0031877
 protein coding gene Chr7:24218913-24226899 (-)
A/J MGP_AJ_G0031856
 protein coding gene Chr7:23586245-23594227 (-)
AKR/J MGP_AKRJ_G0031785
 protein coding gene Chr7:24192634-24200616 (-)
BALB/cJ MGP_BALBcJ_G0031861
 protein coding gene Chr7:23825991-23833973 (-)
C3H/HeJ MGP_C3HHeJ_G0031582
 protein coding gene Chr7:24602250-24610232 (-)
C57BL/6NJ MGP_C57BL6NJ_G0032325
 protein coding gene Chr7:25035398-25043380 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0029380
 protein coding gene Chr7:24926108-24934251 (-)
CAST/EiJ MGP_CASTEiJ_G0030922
 protein coding gene Chr7:18016424-18024413 (-)
CBA/J MGP_CBAJ_G0031547
 protein coding gene Chr7:25918739-25926721 (-)
DBA/2J MGP_DBA2J_G0031701
 protein coding gene Chr7:23480262-23488244 (-)
FVB/NJ MGP_FVBNJ_G0031654
 protein coding gene Chr7:23511622-23519604 (-)
LP/J MGP_LPJ_G0031780
 protein coding gene Chr7:24496517-24504503 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0031691
 protein coding gene Chr7:25644020-25651997 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0032357
 protein coding gene Chr7:23830418-23838400 (-)
PWK/PhJ MGP_PWKPhJ_G0030646
 protein coding gene Chr7:18432341-18440376 (-)
SPRET/EiJ MGP_SPRETEiJ_G0030476
 protein coding gene Chr7:15160355-15168316 (-)
WSB/EiJ MGP_WSBEiJ_G0031025
 protein coding gene Chr7:24056440-24064414 (-)



Homology
more
  • Human Ortholog
    CCDC97, coiled-coil domain containing 97
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CCDC97, coiled-coil domain containing 97
  • Links
    NCBI Gene ID: 90324
    neXtProt AC: NX_Q96F63
    UniProt: Q96F63

  • Chr Location
    19q13.2; chr19:41310172-41324873 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    67
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 52132 NCBI Gene Model | MGI Sequence Detail 7924 C57BL/6J ±  kb
transcript NM_001368383 RefSeq | MGI Sequence Detail 3254 ZRU/MplStud  
polypeptide Q9DBT3 UniProt | EBI | MGI Sequence Detail 340 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 69
    cDNA 68
    Primer pair 1

    Microarray probesets 5
Other
Accession IDs
less
MGI:1920021, MGI:1921378, MGI:2141840
References
more
  • Summaries
    All 32
    Gene Ontology 1
    Phenotypes 4
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory