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Cyp2c40 Gene Detail
Summary
  • Symbol
    Cyp2c40
  • Name
    cytochrome P450, family 2, subfamily c, polypeptide 40
  • Feature Type
    protein coding gene
  • IDs
    MGI:1306815
    NCBI Gene: 13099
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr19:39755517-39801258 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 19, 34.24 cM
  • Mapping Data
    4 experiments
Strain
Comparison
more
  • SNPs within 2kb
    890 from dbSNP Build 142
  • Strain Annotations
    12
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1306815
 protein coding gene Chr19:39755515-39801258 (-)
129S1/SvImJ MGP_129S1SvImJ_G0025106
 protein coding gene Chr19:38717233-38885462 (-)
A/J MGP_AJ_G0025081
 protein coding gene Chr19:36986607-37030541 (-)
AKR/J no annotation
BALB/cJ MGP_BALBcJ_G0025077
 protein coding gene Chr19:36977461-36991629 (-)
C3H/HeJ MGP_C3HHeJ_G0024836
 protein coding gene Chr19:38178691-38392539 (-)
C57BL/6NJ MGP_C57BL6NJ_G0025518
 protein coding gene Chr19:39860003-40085820 (-)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J MGP_DBA2J_G0024946
 protein coding gene Chr19:36811547-36975659 (-)
FVB/NJ MGP_FVBNJ_G0024909
 protein coding gene Chr19:36674509-36722763 (-)
LP/J MGP_LPJ_G0025032
 protein coding gene Chr19:38769259-39092346 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0024938
 protein coding gene Chr19:41386991-41742121 (-)
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0023854
 protein coding gene Chr19:37143205-37150135 (-)
WSB/EiJ MGP_WSBEiJ_G0024369
 protein coding gene Chr19:38281886-38324824 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    11
  • GO References
    5
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    718
  • Tissues
    12
  • cDNA Data
    31
  • Literature Summary
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 13099 NCBI Gene Model | MGI Sequence Detail 45742 C57BL/6J ±  kb
transcript NM_010004 RefSeq | MGI Sequence Detail 1801 C57BL/6  
polypeptide P56657 UniProt | EBI | MGI Sequence Detail 491 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 32
    cDNA 31
    Primer pair 1

    Microarray probesets 2
Other
Accession IDs
less
MGI:2147496, MGI:2147589
References
more
  • Summaries
    All 29
    Developmental Gene Expression 2
    Gene Ontology 5
    Phenotypes 6
  • Earliest
    J:49570 Luo G, et al., Cloning and expression of murine CYP2Cs and their ability to metabolize arachidonic acid. Arch Biochem Biophys. 1998 Sep 1;357(1):45-57
  • Latest
    J:341617 Zhang J, et al., CYP eicosanoid pathway mediates colon cancer-promoting effects of dietary linoleic acid. FASEB J. 2023 Jul;37(7):e23009
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory