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Sh3d2c-ps1 Pseudogene Detail
Summary
  • Symbol
    Sh3d2c-ps1
  • Name
    SH3 domain protein 2C, pseudogene 1
  • Synonyms
    Sh3d2c1
  • Feature Type
    pseudogene
  • IDs
    MGI:1313300
    NCBI Gene: 20406
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr2:23570230-23571133 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 15.68 cM, cytoband B
  • Mapping Data
    7 experiments
Strain
Comparison
more
  • SNPs within 2kb
    151 from dbSNP Build 142
  • Strain Annotations
    18
  • RFLP
    3
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1313300
 pseudogene Chr2:23570160-23571602 (+)
129S1/SvImJ MGP_129S1SvImJ_G0011562
 pseudogene Chr2:21451659-21452562 (+)
A/J MGP_AJ_G0011559
 pseudogene Chr2:20623986-20624889 (+)
AKR/J MGP_AKRJ_G0011524
 pseudogene Chr2:21315757-21316660 (+)
BALB/cJ MGP_BALBcJ_G0011539
 pseudogene Chr2:20713919-20714822 (+)
C3H/HeJ MGP_C3HHeJ_G0011424
 pseudogene Chr2:21258403-21259306 (+)
C57BL/6NJ MGP_C57BL6NJ_G0011830
 pseudogene Chr2:22092122-22093025 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0010366
 pseudogene Chr2:19651537-19652441 (+)
CAST/EiJ MGP_CASTEiJ_G0011224
 pseudogene Chr2:21151990-21152893 (+)
CBA/J MGP_CBAJ_G0011397
 pseudogene Chr2:22945749-22946652 (+)
DBA/2J MGP_DBA2J_G0011455
 pseudogene Chr2:20482208-20483111 (+)
FVB/NJ MGP_FVBNJ_G0011455
 pseudogene Chr2:20236984-20237885 (+)
LP/J MGP_LPJ_G0011519
 pseudogene Chr2:21403020-21403923 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0011454
 pseudogene Chr2:23058615-23059518 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0011819
 pseudogene Chr2:21246605-21247508 (+)
PWK/PhJ MGP_PWKPhJ_G0011083
 pseudogene Chr2:20311829-20312733 (+)
SPRET/EiJ MGP_SPRETEiJ_G0010903
 pseudogene Chr2:21385306-21386206 (+)
WSB/EiJ MGP_WSBEiJ_G0011248
 pseudogene Chr2:21362638-21363541 (+)



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000083729 Ensembl Gene Model | MGI Sequence Detail 904 C57BL/6J ±  kb
transcript ENSMUST00000121498 Ensembl | MGI Sequence Detail 904 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 4
    Genomic 3
    cDNA 1
Other
Accession IDs
less
MGI:1336886
References
more
  • Summaries
    All 10
  • Earliest
    J:35786 Sparks AB, et al., Cloning of ligand targets: systematic isolation of SH3 domain-containing proteins. Nat Biotechnol. 1996 Jun;14(6):741-4
  • Latest
    J:70959 Wang L, et al., Mouse histamine N-methyltransferase: cDNA cloning, expression, gene cloning and chromosomal localization. Inflamm Res. 2001 Jun;50(6):300-8
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory