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Prdx2-ps1 Pseudogene Detail
Summary
  • Symbol
    Prdx2-ps1
  • Name
    peroxiredoxin 2, pseudogene 1
  • Synonyms
    Gm7110, Prx ll-2, Tdpx-ps1
  • Feature Type
    pseudogene
  • IDs
    MGI:1321403
    NCBI Gene: 633295
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:99718154-99718750 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, 48.23 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    212 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1321403
 pseudogene Chr1:99717924-99718821 (-)
129S1/SvImJ MGP_129S1SvImJ_G0010257
 pseudogene Chr1:101625350-101625946 (-)
A/J MGP_AJ_G0011317
 pseudogene Chr17:22370044-22370551 (+)
AKR/J MGP_AKRJ_G0011281
 pseudogene Chr17:22437447-22437954 (+)
BALB/cJ MGP_BALBcJ_G0011292
 pseudogene Chr17:22552363-22552870 (+)
C3H/HeJ MGP_C3HHeJ_G0011182
 pseudogene Chr17:22768869-22769376 (+)
C57BL/6NJ MGP_C57BL6NJ_G0010496
 pseudogene Chr1:105623361-105623957 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0009988
 pseudogene Chr1:100281887-100282483 (-)
CBA/J MGP_CBAJ_G0011164
 pseudogene Chr17:24829862-24830369 (+)
DBA/2J MGP_DBA2J_G0011215
 pseudogene Chr17:21949647-21950154 (+)
FVB/NJ MGP_FVBNJ_G0011216
 pseudogene Chr17:21664785-21665292 (+)
LP/J MGP_LPJ_G0010244
 pseudogene Chr1:102939259-102939855 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0011211
 pseudogene Chr17:24559318-24559825 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0010461
 pseudogene Chr1:100955887-100956483 (-)
PWK/PhJ MGP_PWKPhJ_G0010876
 pseudogene Chr17:20697906-20698413 (+)
SPRET/EiJ MGP_SPRETEiJ_G0009707
 pseudogene Chr1:99747866-99748458 (-)
WSB/EiJ MGP_WSBEiJ_G0011047
 pseudogene Chr17:22757341-22757848 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    2
  • Radiation induced
    1
  • Genomic Mutations
    3 involving Prdx2-ps1
  • Find Mice (IMSR)
    0 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    22
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000082431 Ensembl Gene Model | MGI Sequence Detail 597 C57BL/6J ±  kb
transcript ENSMUST00000117372 Ensembl | MGI Sequence Detail 597 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    Genomic 1
    Primer pair 1

    Microarray probesets 2
Other
Accession IDs
less
MGI:3648264, MGI:6276279
References
more
  • Summaries
    All 11
    Phenotypes 4
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:49541 Lim MJ, et al., The type II peroxiredoxin gene family of the mouse: molecular structure, expression and evolution. Gene. 1998 Aug 17;216(1):197-205
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory