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Ubxn8 Gene Detail
Summary
  • Symbol
    Ubxn8
  • Name
    UBX domain protein 8
  • Synonyms
    D0H8S2298E, Rep-8, Rep8h, Ubxd6
  • Feature Type
    protein coding gene
  • IDs
    MGI:1337129
    NCBI Gene: 108159
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:34109614-34131995 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 8, 20.65 cM, cytoband A3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    741 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1337129
 protein coding gene Chr8:34109614-34135515 (-)
129S1/SvImJ MGP_129S1SvImJ_G0033525
 protein coding gene Chr8:32076615-32102405 (-)
A/J MGP_AJ_G0033505
 protein coding gene Chr8:30847801-30870621 (-)
AKR/J MGP_AKRJ_G0033429
 protein coding gene Chr8:31810807-31841533 (-)
BALB/cJ MGP_BALBcJ_G0033501
 protein coding gene Chr8:30970174-30992701 (-)
C3H/HeJ MGP_C3HHeJ_G0033213
 protein coding gene Chr8:32139801-32162012 (-)
C57BL/6NJ MGP_C57BL6NJ_G0034017
 protein coding gene Chr8:33310136-33333675 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0030966
 protein coding gene Chr8:27654209-27678018 (-)
CAST/EiJ MGP_CASTEiJ_G0032540
 protein coding gene Chr8:31564077-31592197 (-)
CBA/J MGP_CBAJ_G0033191
 protein coding gene Chr8:34622008-34647249 (-)
DBA/2J MGP_DBA2J_G0033344
 protein coding gene Chr8:30831540-30854187 (-)
FVB/NJ MGP_FVBNJ_G0033289
 protein coding gene Chr8:30492393-30514800 (-)
LP/J MGP_LPJ_G0033434
 protein coding gene Chr8:32031584-32055991 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0033331
 protein coding gene Chr8:34151454-34174760 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0034036
 protein coding gene Chr8:31894578-31916782 (-)
PWK/PhJ MGP_PWKPhJ_G0032252
 protein coding gene Chr8:30346045-30368924 (-)
SPRET/EiJ MGP_SPRETEiJ_G0032083
 protein coding gene Chr8:31175691-31201148 (-)
WSB/EiJ MGP_WSBEiJ_G0032656
 protein coding gene Chr8:32035909-32060938 (-)



Homology
more
  • Human Ortholog
    UBXN8, UBX domain protein 8
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    UBXN8, UBX domain protein 8
  • Synonyms
    D8S2298E, REP8, UBXD6
  • Links
    NCBI Gene ID: 7993
    neXtProt AC: NX_O00124
    UniProt: O00124

  • Chr Location
    8p12; chr8:30729131-30767006 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    8
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    718
  • Tissues
    12
  • cDNA Data
    9
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000052906 Ensembl Gene Model | MGI Sequence Detail 22382 C57BL/6J ±  kb
transcript ENSMUST00000095349 Ensembl | MGI Sequence Detail 2808 Not Applicable  
polypeptide ENSMUSP00000092992 Ensembl | MGI Sequence Detail 277 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 11
    cDNA 10
    Other 1

    Microarray probesets 3
References
more
  • Summaries
    All 28
    Developmental Gene Expression 1
    Gene Ontology 3
    Phenotypes 4
  • Earliest
    J:52878 Yamabe Y, et al., Structures of mouse Rep-8 cDNA and genomic clones. Gene. 1999 Feb 4;227(1):39-47
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory