About   Help   FAQ
Ly6h Gene Detail
Summary
  • Symbol
    Ly6h
  • Name
    lymphocyte antigen 6 family member H
  • Feature Type
    protein coding gene
  • IDs
    MGI:1346030
    NCBI Gene: 23934
  • Member of
    Ly6 cluster
  • Alliance
    gene page
  • Transcription Start Sites
    13 TSS
Location &
Maps
more
  • Sequence Map
    Chr15:75436594-75439114 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 15, 34.52 cM, cytoband E1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    90 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1346030
 protein coding gene Chr15:75424894-75439114 (-)
129S1/SvImJ MGP_129S1SvImJ_G0021953
 protein coding gene Chr15:75567621-75583579 (-)
A/J MGP_AJ_G0021911
 protein coding gene Chr15:72830027-72846386 (-)
AKR/J MGP_AKRJ_G0021894
 protein coding gene Chr15:74790434-74806305 (-)
BALB/cJ MGP_BALBcJ_G0021920
 protein coding gene Chr15:72842998-72860477 (-)
C3H/HeJ MGP_C3HHeJ_G0021692
 protein coding gene Chr15:74855818-74873419 (-)
C57BL/6NJ MGP_C57BL6NJ_G0022360
 protein coding gene Chr15:78395951-78416295 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0019891
 protein coding gene Chr15:69508795-69524110 (-)
CAST/EiJ MGP_CASTEiJ_G0021211
 protein coding gene Chr15:75623232-75645159 (-)
CBA/J MGP_CBAJ_G0021659
 protein coding gene Chr15:80926678-80942436 (-)
DBA/2J MGP_DBA2J_G0021784
 protein coding gene Chr15:72341675-72362557 (-)
FVB/NJ MGP_FVBNJ_G0021765
 protein coding gene Chr15:71400776-71416643 (-)
LP/J MGP_LPJ_G0021855
 protein coding gene Chr15:75661032-75680514 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0021789
 protein coding gene Chr15:86208306-86224226 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0022380
 protein coding gene Chr15:75034941-75053772 (-)
PWK/PhJ MGP_PWKPhJ_G0020952
 protein coding gene Chr15:72482586-72498630 (-)
SPRET/EiJ MGP_SPRETEiJ_G0020791
 protein coding gene Chr15:74758714-74785877 (-)
WSB/EiJ MGP_WSBEiJ_G0021263
 protein coding gene Chr15:75123626-75141512 (-)



Homology
more
  • Human Ortholog
    LY6H, lymphocyte antigen 6 family member H
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    LY6H, lymphocyte antigen 6 family member H
  • Synonyms
    NMLY6
  • Links
    NCBI Gene ID: 4062
    neXtProt AC: NX_O94772
    UniProt: O94772

  • Chr Location
    8q24.3; chr8:143157914-143160711 (-)  GRCh38
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    28 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    10
  • GO References
    5
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    947
  • Tissues
    68
  • cDNA Data
    35
  • Literature Summary
    7
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 23934 NCBI Gene Model | MGI Sequence Detail 2521 C57BL/6J ±  kb
transcript NM_001411858 RefSeq | MGI Sequence Detail 1072 C57BL/6  
polypeptide Q9WUC3 UniProt | EBI | MGI Sequence Detail 139 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 36
    cDNA 35
    Primer pair 1

    Microarray probesets 3
References
more
  • Summaries
    All 57
    Developmental Gene Expression 7
    Diseases 1
    Gene Ontology 5
    Phenotypes 28
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory