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Rps11 Gene Detail
Summary
  • Symbol
    Rps11
  • Name
    ribosomal protein S11
  • Feature Type
    protein coding gene
  • IDs
    MGI:1351329
    NCBI Gene: 27207
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:44771812-44773813 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 29.14 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    210 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1351329
 protein coding gene Chr7:44771803-44773863 (-)
129S1/SvImJ MGP_129S1SvImJ_G0032200
 protein coding gene Chr7:45357748-45359749 (-)
A/J MGP_AJ_G0032179
 protein coding gene Chr7:44495110-44497111 (-)
AKR/J MGP_AKRJ_G0032115
 protein coding gene Chr7:45724580-45726581 (-)
BALB/cJ MGP_BALBcJ_G0032191
 protein coding gene Chr7:44493582-44495583 (-)
C3H/HeJ MGP_C3HHeJ_G0031907
 protein coding gene Chr7:46221045-46223082 (-)
C57BL/6NJ MGP_C57BL6NJ_G0032683
 protein coding gene Chr7:47626012-47628019 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0029697
 protein coding gene Chr7:47058644-47060652 (-)
CAST/EiJ MGP_CASTEiJ_G0031235
 protein coding gene Chr7:37604656-37606685 (-)
CBA/J MGP_CBAJ_G0031871
 protein coding gene Chr7:49181678-49185661 (-)
DBA/2J MGP_DBA2J_G0032029
 protein coding gene Chr7:44164809-44166810 (-)
FVB/NJ MGP_FVBNJ_G0031980
 protein coding gene Chr7:43942741-43944742 (-)
LP/J MGP_LPJ_G0032107
 protein coding gene Chr7:46038920-46040921 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0032017
 protein coding gene Chr7:47900798-47904721 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0032699
 protein coding gene Chr7:44940927-44942928 (-)
PWK/PhJ MGP_PWKPhJ_G0030958
 protein coding gene Chr7:37530029-37531599 (-)
SPRET/EiJ MGP_SPRETEiJ_G0030795
 protein coding gene Chr7:32953402-32955411 (-)
WSB/EiJ MGP_WSBEiJ_G0031352
 protein coding gene Chr7:45431257-45433258 (-)



Homology
more
  • Human Ortholog
    RPS11, ribosomal protein S11
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    RPS11, ribosomal protein S11
  • Synonyms
    S11, uS17
  • Links
    NCBI Gene ID: 6205
    neXtProt AC: NX_P62280
    UniProt: P62280

  • Chr Location
    19q13.33; chr19:49496365-49499708 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    24
  • GO References
    9
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    711
  • Tissues
    5
  • cDNA Data
    7
  • Literature Summary
    5
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 27207 NCBI Gene Model | MGI Sequence Detail 2002 C57BL/6J ±  kb
transcript NM_013725 RefSeq | MGI Sequence Detail 602 C57BL/6  
polypeptide P62281 UniProt | EBI | MGI Sequence Detail 158 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    6 Sequences
  • Protein Ontology
    PR:000014252 eukaryotic-type small ribosomal subunit protein uS17
    (term hierarchy)
  • PDB
    7CPU, 7CPV, 7LS1, 7LS2
  • InterPro Domains
    IPR012340 Nucleic acid-binding, OB-fold
    IPR000266 Small ribosomal subunit protein uS17
    IPR028333 Small ribosomal subunit protein uS17, archaeal/eukaryotic
    IPR019979 Small ribosomal subunit protein uS17, conserved site
    IPR032440 Small ribosomal subunit protein uS17, N-terminal
  • GlyGen
    P62281 1 site, 1 O-linked glycan (1 site)
Molecular
Reagents
less
  • All nucleic 9
    cDNA 8
    Primer pair 1

    Microarray probesets 2
References
more
  • Summaries
    All 36
    Developmental Gene Expression 5
    Gene Ontology 9
    Phenotypes 6
  • Earliest
    J:1572 Varmuza S, et al., Isolation of epiblast-specific cDNA clones by differential hybridization with polymerase chain reaction-amplified probes derived from single embryos. Mol Reprod Dev. 1992 Aug;32(4):339-48
  • Latest
    J:333015 Li H, et al., A male germ-cell-specific ribosome controls male fertility. Nature. 2022 Dec;612(7941):725-731
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory