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Sap30l Gene Detail
Summary
  • Symbol
    Sap30l
  • Name
    SAP30-like
  • Synonyms
    2310079P12Rik, L55
  • Feature Type
    protein coding gene
  • IDs
    MGI:1354709
    NCBI Gene: 50724
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:57692463-57701043 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 35.27 cM, cytoband B2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    296 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1354709
 protein coding gene Chr11:57692439-57705707 (+)
129S1/SvImJ MGP_129S1SvImJ_G0018339
 protein coding gene Chr11:57439959-57449572 (+)
A/J MGP_AJ_G0018308
 protein coding gene Chr11:55270294-55278899 (+)
AKR/J MGP_AKRJ_G0018277
 protein coding gene Chr11:57086386-57094841 (+)
BALB/cJ MGP_BALBcJ_G0018279
 protein coding gene Chr11:55609076-55618144 (+)
C3H/HeJ MGP_C3HHeJ_G0018091
 protein coding gene Chr11:57017075-57025685 (+)
C57BL/6NJ MGP_C57BL6NJ_G0018731
 protein coding gene Chr11:59194932-59203433 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0016381
 protein coding gene Chr11:52630196-52639132 (+)
CAST/EiJ MGP_CASTEiJ_G0017655
 protein coding gene Chr11:57086413-57174116 (+)
CBA/J MGP_CBAJ_G0018065
 protein coding gene Chr11:61931712-61940585 (+)
DBA/2J MGP_DBA2J_G0018174
 protein coding gene Chr11:54916169-54924769 (+)
FVB/NJ MGP_FVBNJ_G0018166
 protein coding gene Chr11:54612732-54621346 (+)
LP/J MGP_LPJ_G0018249
 protein coding gene Chr11:57948286-57970727 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0018192
 protein coding gene Chr11:63061040-63069659 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0018773
 protein coding gene Chr11:57115588-57124153 (+)
PWK/PhJ MGP_PWKPhJ_G0017428
 protein coding gene Chr11:55517354-55526452 (+)
SPRET/EiJ MGP_SPRETEiJ_G0017223
 protein coding gene Chr11:56989375-56998318 (+)
WSB/EiJ MGP_WSBEiJ_G0017703
 protein coding gene Chr11:56762568-56774139 (+)



Homology
more
  • Human Ortholog
    SAP30L, SAP30 like
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SAP30L, SAP30 like
  • Synonyms
    NS4ATP2
  • Links
    NCBI Gene ID: 79685
    neXtProt AC: NX_Q9HAJ7
    UniProt: Q9HAJ7

  • Chr Location
    5q33.2; chr5:154445997-154461053 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    9
  • Chemically induced (other)
    1
  • Endonuclease-mediated
    1
  • Gene trapped
    7
  • Genomic Mutations
    1 involving Sap30l
  • Find Mice (IMSR)
    9 strains or lines available
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    35
  • GO References
    8
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    708
  • Tissues
    1
  • cDNA Data
    43
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000020519 Ensembl Gene Model | MGI Sequence Detail 8581 C57BL/6J ±  kb
transcript ENSMUST00000020826 Ensembl | MGI Sequence Detail 1151 Not Applicable  
polypeptide ENSMUSP00000020826 Ensembl | MGI Sequence Detail 182 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000014450 histone deacetylase complex subunit SAP30L
    (term hierarchy)
  • InterPro Domains
    IPR024145 Histone deacetylase complex subunit SAP30/SAP30-like
    IPR025718 Histone deacetylase complex subunit SAP30, Sin3 binding domain
    IPR025717 Histone deacetylase complex subunit SAP30 zinc-finger
    IPR038291 SAP30, C-terminal domain superfamily
Molecular
Reagents
less
  • All nucleic 44
    cDNA 43
    Primer pair 1

    Microarray probesets 3
References
more
  • Summaries
    All 38
    Developmental Gene Expression 1
    Gene Ontology 8
    Phenotypes 6
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:294964 Vincentz JW, et al., Variation in a Left Ventricle-Specific Hand1 Enhancer Impairs GATA Transcription Factor Binding and Disrupts Conduction System Development and Function. Circ Res. 2019 Aug 30;125(6):575-589
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory