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Rps28 Gene Detail
Summary
  • Symbol
    Rps28
  • Name
    ribosomal protein S28
  • Feature Type
    protein coding gene
  • IDs
    MGI:1859516
    NCBI Gene: 54127
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:34042010-34043536 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 17.98 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    1 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1859516
 protein coding gene Chr17:34038001-34043536 (-)
129S1/SvImJ MGP_129S1SvImJ_G0023538
 protein coding gene Chr17:33758640-33764175 (-)
A/J MGP_AJ_G0023497
 protein coding gene Chr17:32597927-32603458 (-)
AKR/J MGP_AKRJ_G0023463
 protein coding gene Chr17:32975791-32981322 (-)
BALB/cJ MGP_BALBcJ_G0023501
 protein coding gene Chr17:32743801-32749224 (-)
C3H/HeJ MGP_C3HHeJ_G0023264
 protein coding gene Chr17:33323688-33330313 (-)
C57BL/6NJ MGP_C57BL6NJ_G0023945
 protein coding gene Chr17:35014916-35022434 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0021418
 protein coding gene Chr17:30106073-30111535 (-)
CAST/EiJ MGP_CASTEiJ_G0022766
 protein coding gene Chr17:33439393-33444941 (-)
CBA/J MGP_CBAJ_G0023240
 protein coding gene Chr17:36403750-36409281 (-)
DBA/2J MGP_DBA2J_G0023369
 protein coding gene Chr17:31976402-31981825 (-)
FVB/NJ MGP_FVBNJ_G0023338
 protein coding gene Chr17:31833576-31839099 (-)
LP/J MGP_LPJ_G0023447
 protein coding gene Chr17:34032098-34037630 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0023358
 protein coding gene Chr17:35462753-35468275 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0023985
 protein coding gene Chr17:33310915-33316448 (-)
PWK/PhJ MGP_PWKPhJ_G0022514
 protein coding gene Chr17:30870192-30875725 (-)
SPRET/EiJ MGP_SPRETEiJ_G0022330
 protein coding gene Chr17:31274729-31280285 (-)
WSB/EiJ MGP_WSBEiJ_G0022825
 protein coding gene Chr17:33345403-33350936 (-)



Homology
more
  • Human Ortholog
    RPS28, ribosomal protein S28
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    RPS28, ribosomal protein S28
  • Synonyms
    DBA15, eS28, S28
  • Links
    NCBI Gene ID: 6234
    neXtProt AC: NX_P62857
    UniProt: P62857

  • Chr Location
    19p13.2; chr19:8321158-8323340 (+)  GRCh38
Human Diseases
more
  • Diseases
    1 with human RPS28 associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 2 alleles in 1 genetic background
    7 phenotype references
Mice homozygous for a gene trap allele are viable and fertile.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    34
  • GO References
    9
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    737
  • Tissues
    22
  • cDNA Data
    4
  • Literature Summary
    4
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 54127 NCBI Gene Model | MGI Sequence Detail 1527 C57BL/6J ±  kb
transcript NM_001355384 RefSeq | MGI Sequence Detail 396 C57BL/6  
polypeptide P62858 UniProt | EBI | MGI Sequence Detail 69 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 7
    cDNA 5
    Primer pair 2

    Microarray probesets 11
References
more
  • Summaries
    All 37
    Developmental Gene Expression 4
    Gene Ontology 9
    Phenotypes 7
  • Earliest
    J:29553 Hassouna N, et al., The complete nucleotide sequence of mouse 28S rRNA gene. Implications for the process of size increase of the large subunit rRNA in higher eukaryotes. Nucleic Acids Res. 1984 Apr 25;12(8):3563-83
  • Latest
    J:333015 Li H, et al., A male germ-cell-specific ribosome controls male fertility. Nature. 2022 Dec;612(7941):725-731
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory