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Smt3h2-ps Pseudogene Detail
Summary
  • Symbol
    Smt3h2-ps
  • Name
    SMT3 suppressor of mif two 3 homolog 2, pseudogene (S. cerevisiae)
  • Synonyms
    Sfc5
  • Feature Type
    pseudogene
  • IDs
    MGI:1859622
    NCBI Gene: 111296
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    ChrX:7618369-7618653 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 3.49 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    89 from dbSNP Build 142
  • Strain Annotations
    13
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1859622
 pseudogene ChrX:7618287-7619435 (+)
129S1/SvImJ MGP_129S1SvImJ_G0014280
 pseudogene ChrX:2368749-2369033 (+)
A/J MGP_AJ_G0014295
 pseudogene ChrX:2329812-2330096 (+)
AKR/J MGP_AKRJ_G0014219
 pseudogene ChrX:2448162-2448446 (+)
BALB/cJ MGP_BALBcJ_G0014245
 pseudogene ChrX:2350874-2351158 (+)
C3H/HeJ MGP_C3HHeJ_G0014074
 pseudogene ChrX:2415746-2416041 (+)
C57BL/6NJ MGP_C57BL6NJ_G0014698
 pseudogene ChrX:2453213-2453497 (+)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0014059
 pseudogene ChrX:2576681-2577386 (+)
DBA/2J MGP_DBA2J_G0014142
 pseudogene ChrX:2355014-2355298 (+)
FVB/NJ MGP_FVBNJ_G0014139
 pseudogene ChrX:2312666-2312950 (+)
LP/J MGP_LPJ_G0014233
 pseudogene ChrX:2390214-2390673 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0014176
 pseudogene ChrX:2541778-2542062 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0014668
 pseudogene ChrX:2355103-2355387 (+)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    17
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000082617 Ensembl Gene Model | MGI Sequence Detail 285 C57BL/6J ±  kb
transcript ENSMUST00000121084 Ensembl | MGI Sequence Detail 285 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 4
    Genomic 4
Other
Accession IDs
less
MGI:3643748
References
more
  • Summaries
    All 6
  • Earliest
    J:62168 Means GD, et al., A transcript map of a 2-Mb BAC contig in the proximal portion of the mouse X chromosome and regional mapping of the scurfy mutation. Genomics. 2000 May 1;65(3):213-23
  • Latest
    J:66695 Brunkow ME, et al., Disruption of a new forkhead/winged-helix protein, scurfin, results in the fatal lymphoproliferative disorder of the scurfy mouse. Nat Genet. 2001 Jan;27(1):68-73
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory